Gene Information

Name : ECP_2972 (ECP_2972)
Accession : YP_670856.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : PixA protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3539
EC number : -
Position : 3138395 - 3138928 bp
Length : 534 bp
Strand : -
Note : -

DNA sequence : 
ATGTTAAAATCAACTTTGGGGATTGCTATTGCTTTTTCATTGTGTGCTGTTGCACATGCAGCCAATCAAGGGCAAGGTGT
TGTTAATTTTAAAGGAACTGTAATTGATGCGCCATGTGGTATTGCTCCGGAATCAGCAGATCAGACAATTGATTTTGGTC
AGATTTCTAAATCGCATTTGAAAAACGACGGTATCTCAGTCAAGAAAGATTTAGATATTAAATTGGTCAATTGTGATTTT
ACTGATCCTACAGCGAAAAAAACAGTAAGTGTCACATTCTCCGGTACGCCTGTTAATGGTCATACTGATGAGCTTGGTAC
TGCTGGTGATACCGGTACTGCTGTTGTTGTATCCGCCTCAGATGGTTCTATGGTTAAATTTGATGGTACAACATCAAGCA
ATGCAACTCAGTTGCAGGATGGCGATAACACGCTGAAATATACGACTTGGGTTAAAAAATCCAGCGCCGCAGGTACTGAA
GTCAAAGAAGGCGATTTCACTGCAGTTGCTAACTTTAATCTGAGTTATCAGTAA

Protein sequence : 
MLKSTLGIAIAFSLCAVAHAANQGQGVVNFKGTVIDAPCGIAPESADQTIDFGQISKSHLKNDGISVKKDLDIKLVNCDF
TDPTAKKTVSVTFSGTPVNGHTDELGTAGDTGTAVVVSASDGSMVKFDGTTSSNATQLQDGDNTLKYTTWVKKSSAAGTE
VKEGDFTAVANFNLSYQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pixA CAE85161.1 PixA protein Not tested PAI V 536 Protein 7e-76 100
papA AAL67417.1 PapA Virulence PAI II CFT073 Protein 1e-37 53
papA_2 NP_757036.1 PapA protein Virulence PAI II CFT073 Protein 4e-37 53
papA YP_002414017.1 P-fimbriae major subunit Not tested Not named Protein 6e-35 52
papA AAZ04426.1 major fibrial protein Virulence PAI I APEC-O1 Protein 9e-34 52
papA YP_854256.1 major fibrial protein Virulence PAI I APEC-O1 Protein 1e-33 52
papA NP_755467.1 PapA protein Virulence PAI I CFT073 Protein 2e-33 50
prfA CAD42031.1 PrfA protein Virulence PAI II 536 Protein 3e-33 49
papA AAC61718.1 PapA Virulence PAI I CFT073 Protein 7e-20 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_2972 YP_670856.1 PixA protein VFG0893 Protein 1e-37 53
ECP_2972 YP_670856.1 PixA protein VFG0882 Protein 6e-34 50
ECP_2972 YP_670856.1 PixA protein VFG1550 Protein 1e-33 49