Gene Information

Name : ECP_2971 (ECP_2971)
Accession : YP_670855.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : PixH protein
Function : -
COG functional category : N : Cell motility
COG ID : COG3539
EC number : -
Position : 3137722 - 3138309 bp
Length : 588 bp
Strand : -
Note : -

DNA sequence :
ATGTTACGACGCATGATCCTTTCGGTACTGTTTCTCTGGTGTGCAGTGGCTCAAGCCCTGCCATCAGCTTCTTTTCCACC
ACCGGGGATGACTTTGCCCGAGTACTGGGGAGAAGAACACGTCTGGTGGGATGGGCGGGCCAGCTTTAAAGGGCAGGTCA
TCGCTCCTGCCTGTACGCTGTCCATGGAGGATGCCTGGCAGGAAATTGATATGGGAACCACGCCACTCAGGGACTTACAG
AACAGTCCTGCCGGTCCCGAGAAGAAATTCCGGCTACGGCTACGCAACTGTGAGCTTACAGGTGCAGGAAAGCAGGTCTA
TACGGCAACCCGGGTGCGTGTGACTTTTGATGGCATTCCCGGAGAAACACCGGACAAATTCTCGCTGACAGGTCAGGCTG
AAGGTATAAATCTGCAGATTATGGATAATTACGGATATCCGGCGAGAGCAGGAAAAAGCATGCCACCTTTAATTCTCAGG
GGGAATGAAGACGGGCTTGATTATTCTCTTCGCATTGTCAGAAATGGTTATCCATTAAAGGCTGGCGATTACTACGCTGC
ATTGCGTTTTAAACTGGACTACGAATAA

Protein sequence :
MLRRMILSVLFLWCAVAQALPSASFPPPGMTLPEYWGEEHVWWDGRASFKGQVIAPACTLSMEDAWQEIDMGTTPLRDLQ
NSPAGPEKKFRLRLRNCELTGAGKQVYTATRVRVTFDGIPGETPDKFSLTGQAEGINLQIMDNYGYPARAGKSMPPLILR
GNEDGLDYSLRIVRNGYPLKAGDYYAALRFKLDYE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pixH CAE85160.1 PixH protein Not tested PAI V 536 Protein 3e-89 100
papH AAZ04425.1 fimbrial regulatory protein Virulence PAI I APEC-O1 Protein 8e-62 65
papH YP_854255.1 minor pilin subunit PapH Virulence PAI I APEC-O1 Protein 1e-61 65
prfH CAD42030.1 PrfH protein Virulence PAI II 536 Protein 1e-59 65
papH NP_755466.1 PapH protein Virulence PAI I CFT073 Protein 1e-59 63
papH_2 NP_757035.1 PapH protein Virulence PAI II CFT073 Protein 1e-59 63
papH AAL67416.1 PapH Virulence PAI II CFT073 Protein 8e-60 63
papH YP_002414016.1 minor pilin protein PapH Not tested Not named Protein 3e-59 62

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_2971 YP_670855.1 PixH protein VFG1549 Protein 4e-60 65
ECP_2971 YP_670855.1 PixH protein VFG0894 Protein 3e-60 63
ECP_2971 YP_670855.1 PixH protein VFG0883 Protein 3e-60 63