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Name : ECP_2970 (ECP_2970) Accession : YP_670854.1 Strain : Escherichia coli 536 Genome accession: NC_008253 Putative virulence/resistance : Virulence Product : fimbrial usher protein PixC Function : - COG functional category : N : Cell motility COG ID : COG3188 EC number : - Position : 3135091 - 3137661 bp Length : 2571 bp Strand : - Note : - DNA sequence : ATGTTGAAGAGGGTTGGTTGCGCCCTTCAAAGTGTTTTTGTATTAAATCGGCTGCATATAATGAAAAAAAATAAATCGAC TTTTACCATCAATTTTATTACGTATTCATTGATGCTTTCTCTGGCAGGAGTGCCTGTCTATGCCGTCGATTTTAATACGG ATGTTCTGGATGCCGCAGACAGACAGAATATTGATTTTTCCCGGTTCTCCCGGGCCGGCTATATTATGCCCGGACAGTAT CAGATGGAAATAAGGGTGAATGGTCAGGATATTTCACCATCGGCATTTCAGATTGCGTTTCTTGAACCACCTTTTTCGGA TTCGGATAACGAGAAACCGTTACCAGAACCCTGCCTGACACCGGAGATAGTCAGCCGGATGGGACTGACTGAGGCGTCAC AGGAAAAAGTTACGTACTGGAATAACGGACAATGTGCGGATTTCCGACAGTTATCCGGAGTGGAGATACGCCCGAATCCA GCAGAAGGGATGCTGTACATCAATATGCCACAGGCCTGGCTGGAATATTCCGATGCCTCCTGGCTGCCGCCGTCCCGCTG GGATAACGGTATTCCCGGACTGTTGTTTGACTACAACATCAACGGGACAGTGAATAAGCCGCATCAGGGGAAACAGTCCC AGTCGCTGAACTATAACGGAACTGCGGGGGCTAACTTCGGTGCCTGGCGTCTGCGTGCGGACTATCAGGGCAACCTGAAT CACACCACCGGCAGTGCGCAGGGGACGGACAGCCAGTTCACCTGGAGCCGTTTCTACATGTACCGCGCCATCCCGCGCTG GCGCGCAAATCTCACACTGGGTGAGAACTACATCAATTCTGAGATTTTCAGCTCCTGGCGCTACACTGGTGCCAGTCTGG AAAGTGATGACCGCATGCTGCCGCCAAAACTGCGCGGTTATGCACCGCAGGTCTCAGGGATTGCGGATACGAATGCGCGT GTCGTGATTTCGCAGCAGGGACGCATACTCTATGACTCCACTGTGCCGGCAGGTCCGTTCACCATTCAGGACCTGGACAG CTCCGTGCGTGGCCGCCTGGATGTTGAAGTTATCGAGCAGGACGGGCGGAAAAAAACGTTCCAGGTGGACACGGCATATG TGCCGTATCTGACCCGTCCGGGCCAGGTTCGTTACAAGCTGGTTTCCGGTCGTTCGCGTACCTATGAGCACACCATGGAG GGTCCGGTCTTTGCTGCCGGTGAGGCATCCTGGGGTATCAGTAACACGTGGTCGCTTTATGGAGGCAGTATTGTTGCCGG GGATTATAACGCTCTGGCTGTGGGGCTGGGCCGGGACCTGAGTAAGTTCGGCACTGTTTCCGCTGACGTAACCCAGTCCG TGGCCCGTATACCGGGTTATGACACAAAACAGGGAAAATCCTGGCGTCTGAGCTATTCCAAACGTTTTGATGAAGTGAAT ACGGATATCACTTTTGCGGGTTACCGCTTCTCTGAACGCAATTACATGACGATGGACCAGTACCTCAATGCCCGTTACCG GAATGATTTTACGGGACGTGAGAAGGAGCTGTACACCGTCACACTCAACAAGAACTTCGAGGACTGGAAGGCATCGGTCA ATCTGCAGTACAGCCATCAGACTTACTGGGACCGCCGGACATCTGACTATTACACGCTGTCGGTGAACCGCTACTTCGAT GCGTTCAGCTTTAAGAATATCGCGCTGGGGATATCTGCATCCCGTTCGAAATACCTGAACCGGGATAACGATTCGGCGTT TGTTCGTCTGTCCGTGCCGTGGGGAACCGGTACGGCCAGCTACAGCGGCAGCATGAGCAACGACCGTTACACCAATACGG TGGGTTACAGCGACACACTGAATAACGGCCTGAGCAGTTACAGCCTGAATGCCGGCGTGAACAGTGGCGGTGGTCAGCCG TCACAACGGCAAATGAGTGCCTATTACAACCATAACGGTTCCCTGACAAATCTGTCAGCCAGTTTCTCTGCCGTGGAGAA CGGATACAGCTCATTCGGGATGAGTGCATCGGGGGGGGCGACGGTCACGATGAAAGGAGCCGCGTTACATGCCGGAGGAA TGAACGGAGGAACCCGTCTTCTGGTGGATACCGATGGTGTCGGAGGTGTGCCGGTTGACGGTGGTCGGGTTTATACCAAC CGGTGGGGAATTGGTGTGGTGACGGATGTGAGCAGTTATTACCGCAACACCACATCAGTAGACCTGAACAAGCTGCCGGA AGATATGGAAGCCACCCGCTCGGTGGTGGAGTCGGTTCTGACGGAAGGGGCCATTGGTTATCGTGAGTTCGAAGTTCTGA AAGGTAGCCGTCTGTTTGCTGTGTTGCGGATGTCTGATAACAGCTATCCGCCCTTTGGTGCCAGCGTGACAAATGCGAAA GGCCGTGAACTGGGGATGGTGGCAGACAGCGGTCTGGCCTGGCTGAGCGGAGTGAATCCGGGAGAAACCCTGAACGTCGG CTGGGACGGCCGGACACAGTGTGTGGTGGACATCCCGGCACATCCGGACCCGGCACAACAGTTGCTGCTGCCCTGTCGTC AGGTGAAGTGA Protein sequence : MLKRVGCALQSVFVLNRLHIMKKNKSTFTINFITYSLMLSLAGVPVYAVDFNTDVLDAADRQNIDFSRFSRAGYIMPGQY QMEIRVNGQDISPSAFQIAFLEPPFSDSDNEKPLPEPCLTPEIVSRMGLTEASQEKVTYWNNGQCADFRQLSGVEIRPNP AEGMLYINMPQAWLEYSDASWLPPSRWDNGIPGLLFDYNINGTVNKPHQGKQSQSLNYNGTAGANFGAWRLRADYQGNLN HTTGSAQGTDSQFTWSRFYMYRAIPRWRANLTLGENYINSEIFSSWRYTGASLESDDRMLPPKLRGYAPQVSGIADTNAR VVISQQGRILYDSTVPAGPFTIQDLDSSVRGRLDVEVIEQDGRKKTFQVDTAYVPYLTRPGQVRYKLVSGRSRTYEHTME GPVFAAGEASWGISNTWSLYGGSIVAGDYNALAVGLGRDLSKFGTVSADVTQSVARIPGYDTKQGKSWRLSYSKRFDEVN TDITFAGYRFSERNYMTMDQYLNARYRNDFTGREKELYTVTLNKNFEDWKASVNLQYSHQTYWDRRTSDYYTLSVNRYFD AFSFKNIALGISASRSKYLNRDNDSAFVRLSVPWGTGTASYSGSMSNDRYTNTVGYSDTLNNGLSSYSLNAGVNSGGGQP SQRQMSAYYNHNGSLTNLSASFSAVENGYSSFGMSASGGATVTMKGAALHAGGMNGGTRLLVDTDGVGGVPVDGGRVYTN RWGIGVVTDVSSYYRNTTSVDLNKLPEDMEATRSVVESVLTEGAIGYREFEVLKGSRLFAVLRMSDNSYPPFGASVTNAK GRELGMVADSGLAWLSGVNPGETLNVGWDGRTQCVVDIPAHPDPAQQLLLPCRQVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixC | CAE85159.1 | PixC protein | Not tested | PAI V 536 | Protein | 0.0 | 100 |
| prfC | CAD42029.1 | PrfC protein | Virulence | PAI II 536 | Protein | 0.0 | 72 |
| papC | AAZ04424.1 | outer membrane usher protein | Virulence | PAI I APEC-O1 | Protein | 0.0 | 72 |
| papC | YP_854254.1 | outer membrane usher protein PapC | Virulence | PAI I APEC-O1 | Protein | 0.0 | 72 |
| papC | NP_755465.1 | PapC protein | Virulence | PAI I CFT073 | Protein | 0.0 | 72 |
| papC | YP_002414015.1 | Outer membrane usher protein PapC | Not tested | Not named | Protein | 0.0 | 72 |
| papC_2 | NP_757034.1 | PapC protein | Virulence | PAI II CFT073 | Protein | 0.0 | 72 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| ECP_2970 | YP_670854.1 | fimbrial usher protein PixC | VFG1548 | Protein | 0.0 | 72 |
| ECP_2970 | YP_670854.1 | fimbrial usher protein PixC | VFG0884 | Protein | 0.0 | 72 |
| ECP_2970 | YP_670854.1 | fimbrial usher protein PixC | VFG0895 | Protein | 0.0 | 72 |
