Gene Information

Name : ECP_2806 (ECP_2806)
Accession : YP_670691.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Virulence
Product : CLPA/B-type chaperone protein
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 2948132 - 2950768 bp
Length : 2637 bp
Strand : +
Note : -

DNA sequence :
ATGACAGGAAATCACCCCGCCGCGCTGCTGCGTCGCCTTAACCCATACTGTGCACGGGCGCTGGACGCCGCCGCCTCGCT
GTGTCAGACCCGCGCCCATGCGGAAATAACCATTGAACACTGGCTGCTGAAACTGCTGGAGCAGGGAGAAGGCGATATCA
CGGTGATTGCCCGCCGCTATGAATGGGATATCGACACGCTCTGGCAGTCTCTGCTGGCACATCTGGACACCTTACCCCGC
CCGGTCCGCGAACGTCCTCAACTTTCTGAACCGCTGGCAGCGCTTATCCGACAGGCGTGGCTGATAGCGTCACTGGAAGG
CGACGATCCACAAATCCGCAGCCAGCATCTGCTGATGGCGCTGACAGAAAAACCGATGCTGCCCGCCTGTAATGACCTGT
GGGTATTGCTGAGTCTGAGCCGCGTGCAGCTTGAGCGGCTGCGTCCCCTGCTGGATGCGCAGTCGGATGAATGTCCGGCA
CGTCAGCCACAGGTCACCGAACCGCTGACCTCTGCACTGCCGGAGACGGCAACGGCGGACGCACCGGCAAAAACGCTGAC
GGAGAAACAGGATGACGCCCTGCTGGCGGTGCTTAACCGCTTTACCGAAGACGTGACGGAAAAAGCCCGCAGCGGGCGAA
TCGACCCGGTATTCGGGCGCGACACGGAAATTCGCCAGATGGTCGATATCCTCTCCCGTCGCCGCAAAAACAACCCGATT
CTGGTGGGAGAACCGGGTGTTGGCAAAACCGCGCTGGTGGAAGGGCTGGCGCTGCGTATCGCCGAAGGCAACGTGCCGGA
CAGCCTGAAAACGGTGCATATCCGCACGCTGGATTTGGGGCTGTTGCAGGCCGGGGCGGGTGTTAAAGGTGAATTTGAAC
AGCGGCTGAAAAACGTGATTGACGCGGTGCAGAAATCGCCGGAGCCGGTGCTGCTGTTTATTGATGAAGCCCATACCATT
ATCGGCGCGGGGAATCAGGCAGGCGGCGCGGATGCGGCGAACCTGCTGAAACCGGCGCTGGCAAGGGGCGAACTGCGCAC
CATCGCCGCCACAACGTGGAGCGAATACAAACAGTATTTTGAGCGCGACGCCGCGCTGGAGCGCCGCTTCCAGATGGTGA
AAGTGGACGAGCCGGATGATGACACCGCCTGCCTGATGCTCAGGGGGCTGAAAGCCCGCTATGCGCAGCACCACGGCGTA
CATATGCTGGACAGCGCCATTCAGACCGCCGTGCGCCTGTCGCGCCGCTATCTGACCGGACGCCAGTTGCCGGACAAGGC
GGTTGATTTGCTGGATACCGCCGGGGCAAGAGTCCGCATGAGCCTCGACACCCTGCCGGAACCGTTGACGCAGCTTCATG
CGCGACTGGCGGCTCTGGATATTGAGCGGGAAGCGATTGAGCAGGACTGCGTGTTTTATCCCGAAGCCAGCCCGGAGCGG
CTGGCGGAACTGACCGATTTGCGTGATGAGCTACAGGCAGAAGCCGGGCATCTGGAAGCGCAGTATCAGCAGGAAAAGGC
ACTGGCGCAGCAGATTATGACGTTGCGTCAGGAAGGGACAGACAGCACTGAACTGCAACAGCAACTGCGAACGCATCAGG
GCTTTGCACCGCTGCTGGCGCTGGATGTGGACGCCCGCGCCGTCGCCACGGTGGTGGCGGACTGGACCGGCATCCCGCTC
TCTTCCCTGCTCAAAGACGAGCAGAGCGACCTGCTCAGTATGGAAAAGAGCCTTGAAAACCGCGTGGTCGGGCAAAGCCC
GGCGCTCTGCGCCATCGCACAGCGGCTGCGGGCGGCTAAAACCGGCCTCACGCCGGAGAACGGCCCACAGGGGGTATTCC
TGCTGACCGGCCCCAGCGGCACCGGTAAAACCGAAACTGCGCTCACACTGGCCGACACCCTGTTTGGCGGTGAAAAATCC
CTTATCACCATTAATCTTTCGGAATATCAGGAACCGCATACCGTTTCCCAGTTGAAAGGTTCGCCTCCGGGCTATGTCGG
CTACGGTCAGGGCGGCGTGCTGACCGAAGCGGTACGCAAACGCCCTTACAGCGTGGTGCTGCTCGACGAAGTGGAAAAGG
CGCATCGCGACGTGATGAACCTGTTCTATCAGGTGTTCGACCGGGGCTTTATGCGCGACGGCGAAGGGCGGGAAATCGAC
TTCCGTAACACCGTGATTCTGATGACCGCCAATCTGGGCAGCGACCACATCATGCAGCTGCTGGAGGAAAAACCGGACGC
CACGGACGCAGACCTGCATGAACTGCTGTACCCCCTGCTGCGAGACCATTTTCAGCCTGCACTGATGGCGCGCTTTCAGA
CGGTGATTTACCGCCCGCTGGGACAGGAGGCGATGCGCGCCATTGTGGAAATGAAACTGGCGCAGGTGGCCCGCCGTCTT
CACCAGCACTATGGGCTGGAAACGGAAATCAGTAACAGCCTGTACGACGCCCTGACCGCCGCCTGCCTGCTGCCGGACAC
CGGTGCGCGTAATATCGACAGCCTGCTGAACCAGCAAATCCTGCCGGTCTTAAGCCAGCAGTTGCTGGCGCAGCAGGCCG
TGCATCATAAGCCTGCCCGACTGCGGCTTGACTGGGATGATGAAGACGGGATTGTGCTGGAATTTGATGAGAAATAA

Protein sequence :
MTGNHPAALLRRLNPYCARALDAAASLCQTRAHAEITIEHWLLKLLEQGEGDITVIARRYEWDIDTLWQSLLAHLDTLPR
PVRERPQLSEPLAALIRQAWLIASLEGDDPQIRSQHLLMALTEKPMLPACNDLWVLLSLSRVQLERLRPLLDAQSDECPA
RQPQVTEPLTSALPETATADAPAKTLTEKQDDALLAVLNRFTEDVTEKARSGRIDPVFGRDTEIRQMVDILSRRRKNNPI
LVGEPGVGKTALVEGLALRIAEGNVPDSLKTVHIRTLDLGLLQAGAGVKGEFEQRLKNVIDAVQKSPEPVLLFIDEAHTI
IGAGNQAGGADAANLLKPALARGELRTIAATTWSEYKQYFERDAALERRFQMVKVDEPDDDTACLMLRGLKARYAQHHGV
HMLDSAIQTAVRLSRRYLTGRQLPDKAVDLLDTAGARVRMSLDTLPEPLTQLHARLAALDIEREAIEQDCVFYPEASPER
LAELTDLRDELQAEAGHLEAQYQQEKALAQQIMTLRQEGTDSTELQQQLRTHQGFAPLLALDVDARAVATVVADWTGIPL
SSLLKDEQSDLLSMEKSLENRVVGQSPALCAIAQRLRAAKTGLTPENGPQGVFLLTGPSGTGKTETALTLADTLFGGEKS
LITINLSEYQEPHTVSQLKGSPPGYVGYGQGGVLTEAVRKRPYSVVLLDEVEKAHRDVMNLFYQVFDRGFMRDGEGREID
FRNTVILMTANLGSDHIMQLLEEKPDATDADLHELLYPLLRDHFQPALMARFQTVIYRPLGQEAMRAIVEMKLAQVARRL
HQHYGLETEISNSLYDALTAACLLPDTGARNIDSLLNQQILPVLSQQLLAQQAVHHKPARLRLDWDDEDGIVLEFDEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 2e-141 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_2806 YP_670691.1 CLPA/B-type chaperone protein VFG2076 Protein 7e-150 44
ECP_2806 YP_670691.1 CLPA/B-type chaperone protein VFG2084 Protein 2e-131 43
ECP_2806 YP_670691.1 CLPA/B-type chaperone protein VFG0079 Protein 3e-101 41