Gene Information

Name : ECP_2024 (ECP_2024)
Accession : YP_669924.1
Strain : Escherichia coli 536
Genome accession: NC_008253
Putative virulence/resistance : Unknown
Product : transposase/IS protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1484
EC number : -
Position : 2097197 - 2097976 bp
Length : 780 bp
Strand : -
Note : -

DNA sequence :
ATGATGGAACTGCAACATCAACGACTGATGGCGCTCGCCGGGCAGTTGCAACTGGAAAGCCTTATAAGCGCAGCGCCTGC
GCTGTCACAACAGGCAGTAGACCAGGAATGGAGTTATATGGACTTCCTGGAGCATCTGCTTCATGAAGAAAAACTGGCAC
GTCATCAACGTAAACAGGCGATGTATACCCGAATGGCAGCCTTCCCGGCGGTGAAAACGTTCGAAGAGTATGACTTCACA
TTCGCCACCGGAGCACCGCAGAAGCAACTCCAGTCGTTACGCTCACTCAGCTTCATAGAACGTAATGAAAATATCGTATT
ACTGGGGCCATCAGGTGTGGGGAAAACCCATCTGGCAATAGCGATGGGCTATGAAGCCGTCCGTGCAGGTATCAAAGTTC
GCTTCACAACAGCAGCAGATCTGTTACTTCAGTTATCTACGGAACAACGTCAGGGCCGTTATAAAACGACGCTTCAGCGT
GGAGTAATGGCCCCCCGCCTGCTCATCATTGATGAAATAGGCTATCTGCCGTTCAGTCAGGAAGAAGCAAAACTGTTCTT
CCAGGTCATTGCTAAACGTTACGAAAAGAGCGCAATGATCCTGACATCCAATCTGCCGTTCGGGCAGTGGGATCAAACGT
TCGCCGGTGATGCAGCACTGACCTCAGCGATGCTGGACCGTATCTTACACCACTCACATGTCGTTCAAATCAAAGGAGAA
AGCTATCGACTCAGACAGAAACGAAAAGCCGGGGTTATAGCAGAAGCTAATCCTGAGTAA

Protein sequence :
MMELQHQRLMALAGQLQLESLISAAPALSQQAVDQEWSYMDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFT
FATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLAIAMGYEAVRAGIKVRFTTAADLLLQLSTEQRQGRYKTTLQR
GVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAMILTSNLPFGQWDQTFAGDAALTSAMLDRILHHSHVVQIKGE
SYRLRQKRKAGVIAEANPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
api84 CAF28558.1 putative transposase Not tested YAPI Protein 3e-120 99
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 3e-120 99
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 2e-119 99
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 3e-120 99
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 3e-120 99
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 4e-120 99
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 3e-120 99
unnamed CAA21402.1 - Not tested HPI Protein 4e-120 99
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 3e-120 99
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 3e-120 99
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 4e-120 99
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 3e-120 99
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 7e-86 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ECP_2024 YP_669924.1 transposase/IS protein VFG1627 Protein 2e-120 99
ECP_2024 YP_669924.1 transposase/IS protein VFG1606 Protein 2e-120 99
ECP_2024 YP_669924.1 transposase/IS protein VFG1663 Protein 1e-119 99
ECP_2024 YP_669924.1 transposase/IS protein VFG1515 Protein 2e-120 99
ECP_2024 YP_669924.1 transposase/IS protein VFG1460 Protein 4e-86 99