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Name : ECP_1938 (ECP_1938) Accession : YP_669839.1 Strain : Escherichia coli 536 Genome accession: NC_008253 Putative virulence/resistance : Virulence Product : cytoplasmic transmembrane protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 1974106 - 1975494 bp Length : 1389 bp Strand : - Note : YbtX DNA sequence : ATGCGCAATTGCTCTCACATCATGGGCGTTATCAGGCGCTGTGGCAGGCGCAAATGGCCGCGCGCGTGTGGCGCGACGAC GGGGTTTCCGCGTCTGGAGAGTGGGTGCATGAGTGATGTTCAGTCGAATGTGAAACCGCTGACGTTGACGACCGGGCGGG TGATTTTTGCTATTGCCGGCGTCTATGTGACGCAGAGTCTGGTATCGGCGCTGTCTATGCAGTCCTTACCCGCGCTGGTG CGCGCTGCTGGCGGTTCGCTGGCGCTTGCCGGTGCGACAACCCTGTTTATGCTGCCCTGGGCGCTGAAGTTTATTTGGGC GCCGTGGATCGAGCGCTGGCGGCTTCCGCCCGGTAGCCAGGAACGCCGTTCCCGCATGTTAATCCTGCGTGGTCAGGTCG CGCTAGCGGCGATCCTGACTATTGCCGCAGCGATTGGCTGGTTTGGGCGAGAAGGGGGATTCCCCGATACGCAAATCGTC GCGTTATTTGTTCTGTTTATGGTGGCAGGCACGGTCGCCTCCACCATTGATATCGCCAGCGACGGCTTTTGTGTCGATCA ACTGACCCGCACGGGTTACGGCTGGGGAAACAGCGTGCAGGTCGGCGGCAGCTATCTGGGAATGATGTGCGGCGGCGGGG TGTTCCTGATGCTGTCGGCGGCATCCGGCTGGCCTGTCGCCATGCTGATGATGGCGGTGCTGATTATGGCGCTGTCACTC CCGCTGTGGCGCATTACGGAGCCGACGCGAACAGCGACTATCCCGCATGTTCCGGCGTTAGGTTATGCGCTAAGGAGGAA GCAGGCGCGCCTGGGCTTACTGCTGGTATTGATGCTGAATTCAGGCATGCGGTTTGTGCTGCCTCTTCTGGCACCGCTGT TGTTGGATCATGGGTTGAGCATGTCCGCATTGGGCGCGCTGTTCAGCGGCGGCAATATTGCAGCGGGCATAGCAGGAACG CTGGCTGGCGGATTGCTGATGAAATACACCTCACCCGGCAGAGCGCTGTTGACGGCTTATGGCGTCCAGGGGATCGCGCT GCTGGCGGTGGTGATGACGCTCATGATGGCGCCGGGTCATCTGCTGCTGCAGATTCTCCAGTGTCTGGTCATTGTCCAGT CCATTTCGCTGGCCTGCGCGCTGGTCTGTCTTTACGCCACGCTGATGTCGCTTTCATCGCCTTTGCAGGCCGGTGTCGAC TTCACCCTCTTTCAATGTACTGATGCGGCAATCGCCATTCTGGCAGGCGTTATCGGTGGCGTTGTTGCTCAACATTTTGG CTATGCGGCCTGCTTCCTGTTTGCCGGGGCATTCACGTTGCTGGCGGCGTGGGTTGCTTATATCCGGCTGCATTCGGCAA GAGAACTGATGACAAGCGCAATTGATTGA Protein sequence : MRNCSHIMGVIRRCGRRKWPRACGATTGFPRLESGCMSDVQSNVKPLTLTTGRVIFAIAGVYVTQSLVSALSMQSLPALV RAAGGSLALAGATTLFMLPWALKFIWAPWIERWRLPPGSQERRSRMLILRGQVALAAILTIAAAIGWFGREGGFPDTQIV ALFVLFMVAGTVASTIDIASDGFCVDQLTRTGYGWGNSVQVGGSYLGMMCGGGVFLMLSAASGWPVAMLMMAVLIMALSL PLWRITEPTRTATIPHVPALGYALRRKQARLGLLLVLMLNSGMRFVLPLLAPLLLDHGLSMSALGALFSGGNIAAGIAGT LAGGLLMKYTSPGRALLTAYGVQGIALLAVVMTLMMAPGHLLLQILQCLVIVQSISLACALVCLYATLMSLSSPLQAGVD FTLFQCTDAAIAILAGVIGGVVAQHFGYAACFLFAGAFTLLAAWVAYIRLHSARELMTSAID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ybtX | YP_853071.1 | hypothetical protein | Not tested | PAI IV APEC-O1 | Protein | 9e-139 | 99 |
| ybtX | CAA21386.1 | - | Virulence | HPI | Protein | 1e-139 | 99 |
| irp8 | YP_001006811.1 | putative signal transducer | Not tested | HPI | Protein | 4e-118 | 99 |
| irp8 | YP_002346906.1 | signal transducer | Not tested | HPI | Protein | 3e-120 | 99 |
| ybtX | YP_070128.1 | MFS superfamily transporter signal transducer | Virulence | HPI | Protein | 3e-120 | 99 |
| ybtX | NP_669702.1 | hypothetical protein | Virulence | HPI | Protein | 8e-140 | 99 |
| ybtX | NP_993011.1 | signal transducer | Virulence | HPI | Protein | 8e-140 | 99 |
| irp8 | CAB46571.1 | signal transducer, Irp8 | Virulence | HPI | Protein | 4e-136 | 98 |
