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Name : Meso_4346 (Meso_4346) Accession : YP_665963.1 Strain : Genome accession: NC_008242 Putative virulence/resistance : Virulence Product : type IV secretion/conjugal transfer ATPase Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 246932 - 249313 bp Length : 2382 bp Strand : - Note : TIGRFAM: type IV secretion/conjugal transfer ATPase, VirB4 family; PFAM: CagE, TrbE, VirB component of type IV transporter system; KEGG: sme:SMa1315 VirB4 type IV secretion protein DNA sequence : TTGCCTAGTACCGCGACCGTCAGGAGCCGTGAGCTCGAACCCGAGACCTTCATCCCCTACGTCCGCCACATCGATGAACG GGTGATCGCGCTTGACTCCCGTGCCCTGATGGTGGTCATCGCGCTCGAAGGCGTGTCGTTCGAGACGGCCGACACGCTGG ACCTCAATGCGCTGCACCGGGACCTCAACACGCTCTACCGCAACATCGCGGATGAGCGGCTGGCGCTGTGGACGCATGTC GTTCGGCGACGCGACAACGAGTATCCTGACGGCGAATTCGCGAACGCCTTCTCGCGCACGCTGAACGACAAGTACCGCAA CCGCATGATCGGCGAGGACTTGTTCCGCAACGATCTGTATCTCAGCCTCGTATGGCACCCGGGCAAGGATGCAGCCGAGC GGGTGGCAGCGTTCCTGTCGAGATTGCGCAAGGCGCGGCGACGCGGGGTGGAGCTTGATGTGGATGCCCTCAAGCGTCTC GACGACACCATCGTCGACGTTACAGCCGGCCTGAAGCGTTTCGGCCCGCGCGTTCTCACCCTTCAAGAGCGCGACGGCCT TGTCTTCTCGGAGCCGAGCGAAGTGCTGCACCAACTGGTGGGCGGCCGCCGTGAAGCCGTGCCGCTGACCGAGGGCCGCG TTTCATCGGCAATTTATTCCGACCGCGTCATTGTCGGACGCGAGACGGTCGAGATCCGTCACGAAGGATCGAGCCGTTAT GCAGGCATGTTCGGTTTCAAGGAATATCCGGCCCGCACGCGGCCCGGCATGTTCGATGGCTTGTTGACCGTCCCCTATGA ACTGATCCTGACCCAGAGCTTCTCATTCCTGTCGAAGTCAGATGCGAAGACGGTGATGGGACGCAAGCAGAACCAGATGG TCAGCGCCGGCGACAAGGCCGGGTCGCAGCTCGAGGAGCTCGATGATGCGCTGGACGATTTGGAATCCAACCGCTTCGTG CTGGGTAACCATCACTTGACGCTTACGGTCTTCGCCGGAACGGTGAGGGAATTAACGGACAATCTGGCGAAGAGCCGAAC CCATCTGACCAACGGCGGCGCGGTCGTTGCGCGCGAGGATCTCGGGCTGGAAGCGGCCTGGTGGGCGCAGCTTCCCGGCA ACTTCCGCTATCGCGTCCGCTCCGGCGCGATCACCTCGAAGAATTTCGCGGCCTTTTCGCCGTTTCATTCCTATCCGGTC GGTCAGCGCGACGGCAACGAATGGGGACCTGCCGTTGCCATGCTGAAGACGGCGTCGGGATCTCCGCTCTATTTCAATCT TCACTATGGCGATCTCGGCAACACCTTCATCGGCGGACCTTCCGGCTCTGGCAAGACGGTGCTGCTCAACTTCATCCTGT CGCAGGGCGAGAAGTTTGATGCCAATATTGTGTTTTTCGACAAGGACCGCGGCGCCGATCTTTTCGTGCGCGCCGCCGGC GGCACATACCTGCCGCTAAAAAATGGCCGGCCGACCGGCTGTGCCCCGCTGAAGGGCATGGAACTGACGCCGGAGAACAA AGTGTTTCTGGCGCAATGGGTGACCAAGCTTGTCGGCTCGAAAACGCGAGAACTCTCCGTCGCGGAAACCCGCGACATCG CCAATGCCATCGATGGGCTCGCCGATCTGCCGGTAGAGCGGCGCACGATCGGCGCGCTGCGCACCTTTCTCAACAACACC GATCCCGAAGGCATCGCATCTCGATTGCGCCGCTGGGAGAGGGGAGGGCCGCTCGGTTGGGTATTCGATAACGTCATTGA GGACATTGGCCTTGGAGACTTCGGTGTTGGCGGCAAGTTCGTCGGCTATGACATGACCGACTTCCTCGACAATGAGGAAA TCCGCACGCCGCTGATGGCCTATCTCTTCCACCGGGTCGAGCAGCTGATCGACGGCCGCCGCATCATCATCGTGATCGAT GAGTTCTGGAAGGCGCTTGCCGACGAAGGCTTTCGCGATCTCGCCCAGAACAAGCTCAAGACCATCCGCAAACAGAATGG GCTCATGCTGTTCGCCACGCAAAGCCCGCGCGATGCGATCAACTCTCCGATTGCGCACACCATCATCGAGCAGTGCCCCA CCCAGGTCTTCATGCCCAACTCGCGTGGCAGTCGAGCCGACTACGTCGACGGCTTCAAGCTCACCGAACGGGAATATGAG CTGATCGCACGGGAGCTCTCCAACGAGAGCCGCCGCTTCATCGTCAAGCAGGGTCATAACAGCGTCGTCGCCGAGCTCAA TCTCGGCGGCTTCGACGACGAACTCGCCGTGCTCTCCGGTCGCACCGCCAACGTCGAACTTGCCGATACGATCCGGGCGG AGACCGGCGACGATCCGGAAGCATGGCTTCCTCTCTTCCAGCAGCAAAGGAGTGCAGGCTGA Protein sequence : MPSTATVRSRELEPETFIPYVRHIDERVIALDSRALMVVIALEGVSFETADTLDLNALHRDLNTLYRNIADERLALWTHV VRRRDNEYPDGEFANAFSRTLNDKYRNRMIGEDLFRNDLYLSLVWHPGKDAAERVAAFLSRLRKARRRGVELDVDALKRL DDTIVDVTAGLKRFGPRVLTLQERDGLVFSEPSEVLHQLVGGRREAVPLTEGRVSSAIYSDRVIVGRETVEIRHEGSSRY AGMFGFKEYPARTRPGMFDGLLTVPYELILTQSFSFLSKSDAKTVMGRKQNQMVSAGDKAGSQLEELDDALDDLESNRFV LGNHHLTLTVFAGTVRELTDNLAKSRTHLTNGGAVVAREDLGLEAAWWAQLPGNFRYRVRSGAITSKNFAAFSPFHSYPV GQRDGNEWGPAVAMLKTASGSPLYFNLHYGDLGNTFIGGPSGSGKTVLLNFILSQGEKFDANIVFFDKDRGADLFVRAAG GTYLPLKNGRPTGCAPLKGMELTPENKVFLAQWVTKLVGSKTRELSVAETRDIANAIDGLADLPVERRTIGALRTFLNNT DPEGIASRLRRWERGGPLGWVFDNVIEDIGLGDFGVGGKFVGYDMTDFLDNEEIRTPLMAYLFHRVEQLIDGRRIIIVID EFWKALADEGFRDLAQNKLKTIRKQNGLMLFATQSPRDAINSPIAHTIIEQCPTQVFMPNSRGSRADYVDGFKLTEREYE LIARELSNESRRFIVKQGHNSVVAELNLGGFDDELAVLSGRTANVELADTIRAETGDDPEAWLPLFQQQRSAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| virB4 | YP_001610000.1 | VirB4 protein | Virulence | Not named | Protein | 0.0 | 63 |
| trwK | CAD42844.1 | TrwK protein | Not tested | trw-PAI | Protein | 8e-138 | 41 |
| trwK | YP_001610476.1 | TrwK protein | Virulence | Not named | Protein | 1e-137 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Meso_4346 | YP_665963.1 | type IV secretion/conjugal transfer ATPase | VFG2233 | Protein | 0.0 | 62 |
| Meso_4346 | YP_665963.1 | type IV secretion/conjugal transfer ATPase | VFG2259 | Protein | 2e-138 | 41 |
