Gene Information

Name : Meso_4340 (Meso_4340)
Accession : YP_665957.1
Strain :
Genome accession: NC_008242
Putative virulence/resistance : Virulence
Product : conjugal transfer protein TrbG/VirB9/CagX
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3504
EC number : -
Position : 243254 - 244111 bp
Length : 858 bp
Strand : -
Note : PFAM: Conjugal transfer protein TrbG/VirB9/CagX; KEGG: sme:SMa1306 VirB9 type IV secretion protein

DNA sequence : 
TTGAGAAAACGATCGTTCCTTGCCGTGGCCATCATCGCGGCACTGACCGCATTCCCTGTTCAGACCCTGGAGATTCCGAC
CAGCGCGCAGCAGGACAATCGCGTGCGTTTCGTCAGCTACCAACCCTACAATATCACCCGCATCGTCGGCACGATCCGTT
CTTCGGTCCAGGTGGAGTTCGCGCCAGACGAGGAAATCGCTCATGTGGCACTCGGCAATACCGTTGCCTGGGAAGTCGCA
CCTGCCGGCCACATCCTGTTCCTCAAACCACGCGAGAACCAACCCGCCACCAACATCTCGGTTGTGACGACACGGCGCGA
CGGCTCCAAGCGCAGCTATCAGATGGAATTGGTCGTTCGAGACGGGTCGGTCGATGCCGGGCAAAATACCTATTTCTATG
TGAAGTACCGTTATCCAGCCGATGAAGCAGAGCGGCGACGCCTCGAGGATGAGGCGAAGAAGCGTGCGGCCGAGGCTGGT
TATGCCGATCAGGTCCTCGGCATCCATGAACAATACGGCCCACGAAACTGGCGTTATTCGGCGCAAGGCTCCGCCGCAAT
CGAACCGCAGGCGGTCTACGATAATGGCAAGGTGACGACCTTTGCCTTCAGCGGCAATCAGGAGATGCCCGCGATCTACA
TAGAGAATTCCGACGGGACGGAAAGCCTGGTGCCGAAGACGGTTCAGGGCGACCTCGTTCTGGTCCATGCGATCAGCCGC
AAGTTTATCCTGCGGCGTGGATCGGACACGCTCTGCATCTTCAACGAGGCCTATTCGCCGGTAGGCGTCGATCCGGGAAC
CAATACCACCTCGCCCTCGGTCGAACGAGTGGTGAAGGTTCCGGCCGCCGGACAATAA

Protein sequence : 
MRKRSFLAVAIIAALTAFPVQTLEIPTSAQQDNRVRFVSYQPYNITRIVGTIRSSVQVEFAPDEEIAHVALGNTVAWEVA
PAGHILFLKPRENQPATNISVVTTRRDGSKRSYQMELVVRDGSVDAGQNTYFYVKYRYPADEAERRRLEDEAKKRAAEAG
YADQVLGIHEQYGPRNWRYSAQGSAAIEPQAVYDNGKVTTFAFSGNQEMPAIYIENSDGTESLVPKTVQGDLVLVHAISR
KFILRRGSDTLCIFNEAYSPVGVDPGTNTTSPSVERVVKVPAAGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vblB9 YP_001610349.1 VblB9 protein Virulence Not named Protein 1e-74 64
virB9 YP_001610005.1 VirB9 protein precursor Virulence Not named Protein 3e-74 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Meso_4340 YP_665957.1 conjugal transfer protein TrbG/VirB9/CagX VFG2238 Protein 4e-75 57