Gene Information

Name : Meso_4331 (Meso_4331)
Accession : YP_665948.1
Strain :
Genome accession: NC_008242
Putative virulence/resistance : Virulence
Product : conjugal transfer coupling protein TraG
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3505
EC number : -
Position : 230977 - 232896 bp
Length : 1920 bp
Strand : -
Note : VirD4 family

DNA sequence :
ATGGCGGGAAAGACGAAACTGAAGCCGGCGCTGTTATGGGCAATCGTGCCTGCCGTCGTGACAGCGATGACCCTGGCGAT
CACATCGTACAGATGGCAGGCAATGGCGGGCGGGTTCTCGCCTGCCAATGCCTATTGGTTCTTACGCTCAGCACCCGTTC
CCAATCTGCTCTTCGGTCCGATCGCGGGATTGATCACTGTCTTCGCGCTGCCGATGCACCGCCGCCGGCCGGTGGCGATG
GTCAGCCTGATCTGCTTTCTCGGGGTCGCCGGCTTTTACGCTTTGCGCGAATATGCGCGGCTGTCCCCATCCGTCGAGAG
CGGCTCGGTGACCTGGGACGAGGTGCTGTCCTATCTCGACTTCTTCGCCGTCATTGCTGCGGCCGTCGGTTTCGTCATCG
TCGCGATATCGGCGCGGATATCGGTCGTCGTGTCCGATCCGGTGAAGCGCGCCAAGCGCGGAACCTTCGGTGATGCCGAT
TGGCTCACCATGTCGGCCGCCGCAAAGCTGTTTCCGCCAGACGGCGAGATCGTCGTCGGCGAACGTTACCGCGTCGACAA
GGAAACGATCCGCGACGTGCCGTTCGATCCGGCCGACCGCGAGACATGGGGAAGCGGCGGCACCGCGCCGCTGCTCACCT
ATAAGCAGGATTTCGATTCCACCCATATGCTGTTCTTTGCGGGCTCAGGCGGATTCAAGACCACCAGCAACGTGGTGCCG
ACGGCGCTGCGCTATACCGGGCCATTGATCTGCCTCGACCCGTCGACCGAAGTCGCACCTATGGTCGTCGAGCACCGGAC
GCAATCGCTCGGGCGAGAGTGCATGGTCCTCGACCCGACAAATCCAGTGACGGGGTTCAACGTTCTCGACTGGATCGAAA
CGTCAAAACACAAGGAGGAGGATATTGTCGCGGTAGCCCACATGCTGCTGTCGGAAAGCGCGCGGTTCGAATCCTCGACC
GGCAGCTATTTCCAGAACCAGGCGCACAATCTTCTGACCGGATTGCTCGCCCATGTGGTGCTCTCTCCGGAATATGCCGG
TCGGCGGAACCTGCGCAGTTTGCGCCAGATCGTCTCCGAGCCGGAACCGTCCGTGCTCGCCATGCTGCGCGACATTCAGG
AGACATCGGCGTCCGCCTTCATCCGCGAAACGCTCGGCGTCTTCACCAACATGACCGAGCAGACATTCTCCGGCGTGTAC
TCCACGGCATCAAAGGATACGCAGTGGCTGTCGCTCGACGATTATGCCGCGCTTGTCTGCGGCCGATCGTTCAAATCGAG
CGATCTCGTCGCCGGAAAGAGGGACGTGTTCCTGAACATCCCTGCCGCCATCCTGCGCTCCTATCCGGGCATTGGCCGGG
TGATCATCGGTTCCCTGATCAATGCCATGACACAGGCCGACGGCGCGTTTCAGCGCCGGGCCCTGTTCATGCTCGATGAA
GTCGATTTGCTTGGCTATATGCGCGTTCTCGAAGAGGCGCGCGATCGCGGTCGAAAATACGGCATCACGCTGATGCTCAT
GTACCAGTCGGTCGGCCAGCTCGAACGGCATTTTGGCAAGGATGGCGCGACGTCATGGATCGATGGATGCGCCTTCGCCT
CCTATGCCGCGATCAAGGCGCTGGAGACCGCGCGGAACGTTTCGGCGCAATGCGGCGAGATGACCGTCGAGGTCGAGGGC
AAATCCCGCAATGTCGGGTGGAGTAATTCCAACAGCGGGTCGCGGCGCTCGGAAAGCCTCAACCTGCAACGCCGCCCTCT
GATCATGCCGCACGAAATCACGCAGCAGATGCGCAAGGACGAGCAGATCATCATCGTACAGGGCCACGACCCGATCCGCT
GCGGGCGGGCGATCTACTTCCGGAGAAAGGACATGGATGCGCAGGCCAGTCCGAACCGTTTCGTCAAGTCCGCCGTTTAG

Protein sequence :
MAGKTKLKPALLWAIVPAVVTAMTLAITSYRWQAMAGGFSPANAYWFLRSAPVPNLLFGPIAGLITVFALPMHRRRPVAM
VSLICFLGVAGFYALREYARLSPSVESGSVTWDEVLSYLDFFAVIAAAVGFVIVAISARISVVVSDPVKRAKRGTFGDAD
WLTMSAAAKLFPPDGEIVVGERYRVDKETIRDVPFDPADRETWGSGGTAPLLTYKQDFDSTHMLFFAGSGGFKTTSNVVP
TALRYTGPLICLDPSTEVAPMVVEHRTQSLGRECMVLDPTNPVTGFNVLDWIETSKHKEEDIVAVAHMLLSESARFESST
GSYFQNQAHNLLTGLLAHVVLSPEYAGRRNLRSLRQIVSEPEPSVLAMLRDIQETSASAFIRETLGVFTNMTEQTFSGVY
STASKDTQWLSLDDYAALVCGRSFKSSDLVAGKRDVFLNIPAAILRSYPGIGRVIIGSLINAMTQADGAFQRRALFMLDE
VDLLGYMRVLEEARDRGRKYGITLMLMYQSVGQLERHFGKDGATSWIDGCAFASYAAIKALETARNVSAQCGEMTVEVEG
KSRNVGWSNSNSGSRRSESLNLQRRPLIMPHEITQQMRKDEQIIIVQGHDPIRCGRAIYFRRKDMDAQASPNRFVKSAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virD4 YP_001610010.1 conjugal transfer coupling protein TraG Not tested Not named Protein 1e-159 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Meso_4331 YP_665948.1 conjugal transfer coupling protein TraG VFG2242 Protein 2e-162 52