Gene Information

Name : Hac_1018 (Hac_1018)
Accession : YP_664781.1
Strain : Helicobacter acinonychis Sheeba
Genome accession: NC_008229
Putative virulence/resistance : Unknown
Product : polysaccharide deacetylase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0726
EC number : -
Position : 885102 - 885983 bp
Length : 882 bp
Strand : -
Note : High confidence in function and specificity

DNA sequence :
ATGGCAAAAGAAATTTTAGTGGCTTATGGCGTGGATATTGATGCGGTGGCTGGTTGGCTAGGGAGCTATGGTGGGGAGGA
TTCGCCTGATGATATTTCGCGTGGGCTTTTTGCAGGGGAAGTGGGGATTCCACGGCTTTTAAAATTGTTTCAAAAATACC
ACCTTCCGGCGACTTGGTTTGCACCTGGGCATTCTATTGAGACTTTTCTAGAGCAAATGAAAATGATCGTAGATGCTGGG
CATGAAGTGGGTGCGCATGGGTATTCGCATGAAAACCCTATCGCTATGACGGCCAAGCAAGAAGAAGATGTCTTGTTAAA
AAGCGTTGAATTGATTAAAAATCTCACCAGCAAAGCCCCCACAGGCTATGTGGCACCGTGGTGGGAATTTTCTAATATCA
CTAATGAATTGCTTTTAAAACACGGCTTCAAATACGACCACTCGCTCATGCACAATGATTTCACGCCCTATTTCGTGCGC
GTGGGGGATAGTTGGAGTAAGATTGATTATAGTTTGGAAGCCAAGGATTGGATGAAGCCTTTAATTCGTGGGGTTGAAAC
AGATTTAGTGGAAATCCCTGCGAATTGGTATTTGGACGATTTACCGCCGATGATGTTTATCAAAAAATCCCCCAATAGCT
TTGGTTTTGTAAGCCCACACGATATAGAGCAAATGTGGATCGATCAATTTGATTGGGTTTATCGTGAAATGGATTATGCG
GTATTTAGCATGACGATCCACCCTGATGTGAGTGGGCGTCCGCAAGTGTTGCTCATGCATGAAAAAATCATTGAACATAT
CAATAAGCATGAGGGCGTGCGTTGGGTAACATTCAATGAAATCGCTGATGATTTCTTGAAACGAAACCCTAGAAAAAAGT
AA

Protein sequence :
MAKEILVAYGVDIDAVAGWLGSYGGEDSPDDISRGLFAGEVGIPRLLKLFQKYHLPATWFAPGHSIETFLEQMKMIVDAG
HEVGAHGYSHENPIAMTAKQEEDVLLKSVELIKNLTSKAPTGYVAPWWEFSNITNELLLKHGFKYDHSLMHNDFTPYFVR
VGDSWSKIDYSLEAKDWMKPLIRGVETDLVEIPANWYLDDLPPMMFIKKSPNSFGFVSPHDIEQMWIDQFDWVYREMDYA
VFSMTIHPDVSGRPQVLLMHEKIIEHINKHEGVRWVTFNEIADDFLKRNPRKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAB46604.1 hypothetical protein Not tested HPI Protein 3e-110 76