Gene Information

Name : tktA (Hac_0794)
Accession : YP_664582.1
Strain : Helicobacter acinonychis Sheeba
Genome accession: NC_008229
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : 2.2.1.1
Position : 691331 - 693256 bp
Length : 1926 bp
Strand : -
Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo

DNA sequence :
ATGCAATTAGATAACGCTGATTTAGAACGATTAAAAAGCATGGCTAACACGCTTCGTTTTTTATGTGCGGACATGATAGA
TAAAGCCAATAGTGGGCATCCGGGCGTGTGCTTGGGGTTGGCTGATGTGATGGTGGTTTTAAGCTTGCATCTCAATCTCA
ACCCTACTAACCCTAAATGGCTCAATAGGGACAGGTTGGTTTTTAGCGGAGGGCATGCGAGCGCACTAGCTTATAGCTTG
TTGCATTTGTGGGGCTTTGATTTGACTTTAGAAGATTTAAAGCATTTCAGGCAATTATACTCTAAAACCCCAGGACACCC
CGAATTACACCACACCGAAGGCATTGAAATCACGACAGGTCCCTTGGGGCAAGGTTTTGCTAACGCTGTGGGCTTTAGCA
TGGCGAGTCAATACGCTCAAAACCTTTTGGATAAAGAAACGATCTCTCATAAAGTCTATTGTTTGTGTGGCGATGGGGAT
TTGCAAGAAGGCATTAGTTATGAGAGTGCTTCTTTAGCCGGACACTTTCGCCTTGATAATCTCATTGTGATTTATGACAG
CAATCAAATCAGTATTGAAGGTGCTATTAATATTAGTTTTAGTGAACAGGTTAAAACACGCTTTTTAGCGCAAAATTGGG
AAGTGCTAGAATGCGATGGACATAACTATCAAGCCATTAATGACGCTTTAGAAAAAGCCAAAAAATCCACCAAACCCACG
CTTTTAATCGCTCACACGATTATTGGTAAGGGGGCTATTGGATTAGAAGGGAGTGAAAAAACGCATGGTTCGCCTTTGAA
TAAAGAAGTGTTAAAACAATCTAAAGAAAACGCCCGCATTAATCCTAATGAAAGCTTTGTGATTAGCCCAAAAAACAAAA
TGCATTTTGAAGAAGTGAAAGTTAGGGGTATCAGTTTAGAAGCCTTATGGGAAAAATCCTTAAACCCTAAAATAAAAGAA
AAAATCCATGCGTTAAAGAATTTTGACTTTAATACCATCAATTACCCTACCTTTAAAAAAGGCGAATCTCTAGCCACTAG
AGTGAGTAATGGCATGATTTTAAACGCTATCGCTAAAGAATGCGAAGGCTTTTTGGGGGGGAGTGCGGATTTAGCCCCAT
CTAATAATACGCATTTAAAACATTCTAGCGATTTCCCTTTAGGGCAAAACTTGCATTTTGGGATTAGAGAGCATGCCATG
GGGGCTATCACTAACGCTTTAGCGGCGTATGGCTTGTTTTTGCCTTTTTGCGCGACCTTTTTTGTGTTTAGCGATTATTT
AATGCCAAGCATGCGTTTGAGTGCTTTAATGCGATTAAAAGCCCTTTTCATTTTTACGCATGACAGCATTGGTGTGGGCG
AAGACGGGGCGACACACCAACCCATAGAGCAATTGAGCCATTTGCGTGCTTTGCCTAATTTCTATGCTTTCAGGCCTAGC
GACGCTTTTGAAAATACCGCTTGCATGCAAGTGGCGTTAAGCTTGAATGCCCCTAGTGCTTTTATTTTATCGCGCCAGAA
TTTGCCCATTCTAGATGAAGTCTCTAAAGAGCAAGTTTTAAAAGGGGCGTATGTTAAACACCACTCTAAAGATCCCATTA
TCACGCTAGTTGCAAGTGGGAGTGAGGTCTCTTTAGCTTTAGAGAGCGCTAAAGTTTTAGAGCGAGAAAATATCCCCACT
CAAGTCATCAGTGTGCCATGCTTTGATTTGTTAATAGGGCAAGATGAAAGCTATCTTAAAGCACTCTTTAAGGGTAAAAT
CTTAGTCATTGAAGCGAGTCGTGCGATAGAGTGGTATCGTTTTGCGGATAAAATCATTTGCATGGATTCTTTTGGGAGTT
CAGCAAAGGGCGATAAACTCTTTGAAAAATTTGGCTTTAGCGTTGAAAATATTACCGCTCAAGCGAAAAGGTTACTTAAC
GCATGA

Protein sequence :
MQLDNADLERLKSMANTLRFLCADMIDKANSGHPGVCLGLADVMVVLSLHLNLNPTNPKWLNRDRLVFSGGHASALAYSL
LHLWGFDLTLEDLKHFRQLYSKTPGHPELHHTEGIEITTGPLGQGFANAVGFSMASQYAQNLLDKETISHKVYCLCGDGD
LQEGISYESASLAGHFRLDNLIVIYDSNQISIEGAINISFSEQVKTRFLAQNWEVLECDGHNYQAINDALEKAKKSTKPT
LLIAHTIIGKGAIGLEGSEKTHGSPLNKEVLKQSKENARINPNESFVISPKNKMHFEEVKVRGISLEALWEKSLNPKIKE
KIHALKNFDFNTINYPTFKKGESLATRVSNGMILNAIAKECEGFLGGSADLAPSNNTHLKHSSDFPLGQNLHFGIREHAM
GAITNALAAYGLFLPFCATFFVFSDYLMPSMRLSALMRLKALFIFTHDSIGVGEDGATHQPIEQLSHLRALPNFYAFRPS
DAFENTACMQVALSLNAPSAFILSRQNLPILDEVSKEQVLKGAYVKHHSKDPIITLVASGSEVSLALESAKVLERENIPT
QVISVPCFDLLIGQDESYLKALFKGKILVIEASRAIEWYRFADKIICMDSFGSSAKGDKLFEKFGFSVENITAQAKRLLN
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 1e-94 41