Name : tktA (Hac_0794) Accession : YP_664582.1 Strain : Helicobacter acinonychis Sheeba Genome accession: NC_008229 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : 2.2.1.1 Position : 691331 - 693256 bp Length : 1926 bp Strand : - Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGCAATTAGATAACGCTGATTTAGAACGATTAAAAAGCATGGCTAACACGCTTCGTTTTTTATGTGCGGACATGATAGA TAAAGCCAATAGTGGGCATCCGGGCGTGTGCTTGGGGTTGGCTGATGTGATGGTGGTTTTAAGCTTGCATCTCAATCTCA ACCCTACTAACCCTAAATGGCTCAATAGGGACAGGTTGGTTTTTAGCGGAGGGCATGCGAGCGCACTAGCTTATAGCTTG TTGCATTTGTGGGGCTTTGATTTGACTTTAGAAGATTTAAAGCATTTCAGGCAATTATACTCTAAAACCCCAGGACACCC CGAATTACACCACACCGAAGGCATTGAAATCACGACAGGTCCCTTGGGGCAAGGTTTTGCTAACGCTGTGGGCTTTAGCA TGGCGAGTCAATACGCTCAAAACCTTTTGGATAAAGAAACGATCTCTCATAAAGTCTATTGTTTGTGTGGCGATGGGGAT TTGCAAGAAGGCATTAGTTATGAGAGTGCTTCTTTAGCCGGACACTTTCGCCTTGATAATCTCATTGTGATTTATGACAG CAATCAAATCAGTATTGAAGGTGCTATTAATATTAGTTTTAGTGAACAGGTTAAAACACGCTTTTTAGCGCAAAATTGGG AAGTGCTAGAATGCGATGGACATAACTATCAAGCCATTAATGACGCTTTAGAAAAAGCCAAAAAATCCACCAAACCCACG CTTTTAATCGCTCACACGATTATTGGTAAGGGGGCTATTGGATTAGAAGGGAGTGAAAAAACGCATGGTTCGCCTTTGAA TAAAGAAGTGTTAAAACAATCTAAAGAAAACGCCCGCATTAATCCTAATGAAAGCTTTGTGATTAGCCCAAAAAACAAAA TGCATTTTGAAGAAGTGAAAGTTAGGGGTATCAGTTTAGAAGCCTTATGGGAAAAATCCTTAAACCCTAAAATAAAAGAA AAAATCCATGCGTTAAAGAATTTTGACTTTAATACCATCAATTACCCTACCTTTAAAAAAGGCGAATCTCTAGCCACTAG AGTGAGTAATGGCATGATTTTAAACGCTATCGCTAAAGAATGCGAAGGCTTTTTGGGGGGGAGTGCGGATTTAGCCCCAT CTAATAATACGCATTTAAAACATTCTAGCGATTTCCCTTTAGGGCAAAACTTGCATTTTGGGATTAGAGAGCATGCCATG GGGGCTATCACTAACGCTTTAGCGGCGTATGGCTTGTTTTTGCCTTTTTGCGCGACCTTTTTTGTGTTTAGCGATTATTT AATGCCAAGCATGCGTTTGAGTGCTTTAATGCGATTAAAAGCCCTTTTCATTTTTACGCATGACAGCATTGGTGTGGGCG AAGACGGGGCGACACACCAACCCATAGAGCAATTGAGCCATTTGCGTGCTTTGCCTAATTTCTATGCTTTCAGGCCTAGC GACGCTTTTGAAAATACCGCTTGCATGCAAGTGGCGTTAAGCTTGAATGCCCCTAGTGCTTTTATTTTATCGCGCCAGAA TTTGCCCATTCTAGATGAAGTCTCTAAAGAGCAAGTTTTAAAAGGGGCGTATGTTAAACACCACTCTAAAGATCCCATTA TCACGCTAGTTGCAAGTGGGAGTGAGGTCTCTTTAGCTTTAGAGAGCGCTAAAGTTTTAGAGCGAGAAAATATCCCCACT CAAGTCATCAGTGTGCCATGCTTTGATTTGTTAATAGGGCAAGATGAAAGCTATCTTAAAGCACTCTTTAAGGGTAAAAT CTTAGTCATTGAAGCGAGTCGTGCGATAGAGTGGTATCGTTTTGCGGATAAAATCATTTGCATGGATTCTTTTGGGAGTT CAGCAAAGGGCGATAAACTCTTTGAAAAATTTGGCTTTAGCGTTGAAAATATTACCGCTCAAGCGAAAAGGTTACTTAAC GCATGA Protein sequence : MQLDNADLERLKSMANTLRFLCADMIDKANSGHPGVCLGLADVMVVLSLHLNLNPTNPKWLNRDRLVFSGGHASALAYSL LHLWGFDLTLEDLKHFRQLYSKTPGHPELHHTEGIEITTGPLGQGFANAVGFSMASQYAQNLLDKETISHKVYCLCGDGD LQEGISYESASLAGHFRLDNLIVIYDSNQISIEGAINISFSEQVKTRFLAQNWEVLECDGHNYQAINDALEKAKKSTKPT LLIAHTIIGKGAIGLEGSEKTHGSPLNKEVLKQSKENARINPNESFVISPKNKMHFEEVKVRGISLEALWEKSLNPKIKE KIHALKNFDFNTINYPTFKKGESLATRVSNGMILNAIAKECEGFLGGSADLAPSNNTHLKHSSDFPLGQNLHFGIREHAM GAITNALAAYGLFLPFCATFFVFSDYLMPSMRLSALMRLKALFIFTHDSIGVGEDGATHQPIEQLSHLRALPNFYAFRPS DAFENTACMQVALSLNAPSAFILSRQNLPILDEVSKEQVLKGAYVKHHSKDPIITLVASGSEVSLALESAKVLERENIPT QVISVPCFDLLIGQDESYLKALFKGKILVIEASRAIEWYRFADKIICMDSFGSSAKGDKLFEKFGFSVENITAQAKRLLN A |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 1e-94 | 41 |