|
Name : ISHa1675 tnpB (Hac_1550) Accession : YP_665265.1 Strain : Helicobacter acinonychis Sheeba Genome accession: NC_008229 Putative virulence/resistance : Unknown Product : ISHa1675 transposase B Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0675 EC number : - Position : 1342387 - 1343670 bp Length : 1284 bp Strand : - Note : IS605 like IS element; High confidence in function and specificity DNA sequence : TTGCTTAACGCTATTAAGTTTAGAATTTATCCTAACGCCCAACAAAAAGAGCTTATTTCTAAACATTTTGGCTGTTCTAG AGTGGTGTATAACTACTTTTTAGATTACCGACAAAAGCAATATGCAAAAGGCATTAAAGAAACTTACTTCACCATGCAAA AAGTCTTAACCCAAATCAAACGGCAAGAAAAATACCATTACCTCAATGAGTGCAATTCTCAAAGCTTGCAAATGGCGTTA AGACAGCTTGTGAGTGCTTATGATAATTTCTTTAGCAAAAGAGCGAGATACCCTAAATTCAAATCCAAGAAAAACGCTAA GCAATCTTTTGCAATCCCCCAAAACATAGAAATCAAAACAGAAACTCAAACAATCGCTCTCCCTAAATTCAAAGAGGGCA TTAAGGCTAAATTACACAGAGAATTGCCTAAAGATAGCGTTATCAAACAGGCTTTTATTTCTTGCATAGCCGATCAATAT TTTTGTTCTATATCCTATGAAACCAAAGAGTCTATCCCTAAACCTACCATCATTAAAAAAGCGGTAGGTTTAGACATGGG CTTAAGAACGCTCATTGTTACAAGCGATAAAATAGAATACCCACACATTCGTTTTTATCAAAAATTAGAAAAGAAACTCA AACAAGCGCAAAGGAGGTTAAGTAAAAAAGTAAAAGGCTCAAACAACAGGAAAAAACAAGCTAAAAAGGTAGCCAGATTG CATTTAGCTTGTTCAAACACTAGAGATGACTACTTGCATAAAATCAGTAATGAGATAACCAATCAATACGATTTGATAGG GGTAGAAACTTTGAATGTTAAAGGTCTTATGAAAACCTATCATTCTAAAAGCCTTGCTAATGCGAGTTGGGGGAAATTCC TTACTATGTTAGAATACAAAACCCAAAGAAAAAGGAAAACCCTATTAGGCATAGACAGATTTTTCCCTAGCTCTCAATTA TGTTCTTATTGTGGGTTCAATACAGGCAAAAAATATGAAAGGATTACCCAATTCACTTGTCCTAATTGTAAGATCACACA CCACAGAGATTACAATGCGAGTGTCAATATTAGAAACTACGCTTTAGGCATGCTAGATGACAGGCATAAAATAAAGATAG ATAAAAGTAGGGTAGGGATTATCCGAACTGATTACGCTCATCACACTAATGAGCGTATCAAAGCTTGTGGAGCTTCCTCT AATGGGGTTAGTTCTAAATATGGCAACATATTAGATCTAGCTAGTTATGGAGCTATGAAGCAAGAAAAAGCCCAATCGCT TTAG Protein sequence : MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIKRQEKYHYLNECNSQSLQMAL RQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKTETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQY FCSISYETKESIPKPTIIKKAVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLKQAQRRLSKKVKGSNNRKKQAKKVARL HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMKTYHSKSLANASWGKFLTMLEYKTQRKRKTLLGIDRFFPSSQL CSYCGFNTGKKYERITQFTCPNCKITHHRDYNASVNIRNYALGMLDDRHKIKIDKSRVGIIRTDYAHHTNERIKACGASS NGVSSKYGNILDLASYGAMKQEKAQSL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnpB | AAF80205.1 | TnpB | Not tested | cag PAI | Protein | 0.0 | 97 |
| tnpB | AAC44710.2 | TnpB | Not tested | cag PAI | Protein | 0.0 | 97 |
