|
Name : neuC (Hac_1270) Accession : YP_665019.1 Strain : Helicobacter acinonychis Sheeba Genome accession: NC_008229 Putative virulence/resistance : Virulence Product : hypothetical protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0381 EC number : - Position : 1092686 - 1093927 bp Length : 1242 bp Strand : - Note : High confidence in function and specificity DNA sequence : ATGGCTTCAAATAAAACTCTTCCATTTTTCGGAGGGGGGGGCGATTTAGAAAGCCCCAAAAAATCCACAAACAACAAAAA TAAGAAAAAAATCGTTTTTGTCACCAACAGCCGGGCGGATTATGGCAAGCTCAAGCCTTTGATGAAAGCCCTTAAGGATT TAAGCCCCAAACACCCCTTATACAATCGGATCGCTTATCGTATTTTTGTGTGTGGCATGCATTTGCTAGAAAAATACGGC AACACTTACATTGAAATTTTAAAAGATGGTTTTGAGCATGTTTTTTTAAGTAAGCCCTATGAAAACGAAATTCCTATGGA CTTTGCTTTAGCCAACACGATCACGCAATTTTCTTCTTTCATTGTGCAAGAAAAACCCGACCTAATTATTGTGCATGGCG ATAGGATAGAGAGCTTGGCATGTGCGATTGTAGCGAGTTTCAATAACATTTTATGCGCGCATATTGAAGGCGGGGAAGTT TCAGGCACGCTGGATGAGAGTATCCGCCATAGCGTGTCAAAACTTGCGCACCTCCATTATGTTTGCAACCAACAAGCGGA GCGAAATTTGATCCAAATGGGCGAAAAAATGGAGTGCATTTTTAATATTGGTTCGAGCGATATTGATGCAATGCTAGGCG ATTTGCCTGACTTTGAAGAAGTGGAGCGCTATTATTATCAAATCAAGCGTTTTAATAGAAATTATGCGATTTTGATCTAC CATCCTGTGGTGAGTGAAACGATTGACTTGCCCAAACATGTTTTTGAAGTGCTAGAGGGGGTTAAGGCGAGTTTAAAAAA CTTTGTCGTGATCTATCCTAATAACGATTTAGGATCAAACATTATCCTAAAGGCTTTAGAGGGTTTAAAGGGGCATGATC GTTTTATCGCTTTCCCTAGCATGCGTTTTGAGTATTTTTTAACGCTCTTGAAAAACGCGCAATTTATCATTGGAAATTCA AGCTGCGGTATTAGAGAAGCAGGGGTGTATGGCGTGCCTTGCATCAATTGCGGCACCAGGCAGCACAACAGAAGCGATGC AAAACACATTATCAATGTCAAAGAAAATAAAGATGAGATTTATCTCGCTATAAAAAAGGTCCATCAATTAAAAAGCATTT TAAAAAAGAGCTCTCATTTTGGTCAAGGCGATAGCGCTAAGCGGTTTTTAGCGAGTTTGAATTTAGAATTGTTTGACACG CCTACGCAAAAAAGCTTTGTGATAAGGGAGGTGAAAGGATGA Protein sequence : MASNKTLPFFGGGGDLESPKKSTNNKNKKKIVFVTNSRADYGKLKPLMKALKDLSPKHPLYNRIAYRIFVCGMHLLEKYG NTYIEILKDGFEHVFLSKPYENEIPMDFALANTITQFSSFIVQEKPDLIIVHGDRIESLACAIVASFNNILCAHIEGGEV SGTLDESIRHSVSKLAHLHYVCNQQAERNLIQMGEKMECIFNIGSSDIDAMLGDLPDFEEVERYYYQIKRFNRNYAILIY HPVVSETIDLPKHVFEVLEGVKASLKNFVVIYPNNDLGSNIILKALEGLKGHDRFIAFPSMRFEYFLTLLKNAQFIIGNS SCGIREAGVYGVPCINCGTRQHNRSDAKHIINVKENKDEIYLAIKKVHQLKSILKKSSHFGQGDSAKRFLASLNLELFDT PTQKSFVIREVKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| synX | NP_273134.1 | polysialic acid capsule biosynthesis protein SynX | Not tested | IHT-A | Protein | 4e-60 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| neuC | YP_665019.1 | hypothetical protein | VFG0254 | Protein | 2e-60 | 44 |
