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Name : Patl_0593 (Patl_0593) Accession : YP_660176.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : NusG antitermination factor Function : - COG functional category : K : Transcription COG ID : COG0250 EC number : - Position : 678622 - 679194 bp Length : 573 bp Strand : + Note : KEGG: cps:CPS_4777 transcription termination/antitermination factor NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: transcription antitermination protein NusG KOW; SMART: NGN KOW (Kyrpides, Ouzounis, Woese) motif DNA sequence : ATGTCAGAAATTACAGAAAATGCGGACGTGCCAGAGAAGTCAGATAAAAAGTGGTATGTCGTTCAGGCGTTCTCTCAATA TGAAGGGCGTGTGAAAAAGACACTTCTTGAATATATTAAAATGCACGAAATGGAAGATTCTTTCGGAGAGATACTTGTTC CTACCGAAGAAGTCATTGAAATGCGCTCTGGCCAACAACGTAAGAGTGAGCGTAAGTTCTTCCCGGGTTACGTATTAGTA CAAATGGATATGAACGAAGATTCATGGCATTTAGTCAAAAGTGTTCCTCGTGTGCTTGGTTTTATCGGTGGTACATCTGA CCGCCCAGCGCCTATCACTACAAAAGAAGCTAATGCTATTTTGAATCGCCTTGAAGAAGGTGTTGATAAGCCAAAACCAA AAACATTGTTCGAACCAGGCGAAGTGGTACGTGTTACCGATGGTCCTTTTGCTGACTTTAATGGTGTGGTTGAAGAAGTC GATTATGAAAAGAGCCGCTTAAAAGTATCGGTGCTTATTTTCGGTCGCTCAACACCTGTAGAATTAGAATTTGGCCAAGT CGAGAAGGGGTAA Protein sequence : MSEITENADVPEKSDKKWYVVQAFSQYEGRVKKTLLEYIKMHEMEDSFGEILVPTEEVIEMRSGQQRKSERKFFPGYVLV QMDMNEDSWHLVKSVPRVLGFIGGTSDRPAPITTKEANAILNRLEEGVDKPKPKTLFEPGEVVRVTDGPFADFNGVVEEV DYEKSRLKVSVLIFGRSTPVELEFGQVEKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00345 | YP_008211671.1 | Transcription antiterminator | Not tested | AbaR26 | Protein | 2e-56 | 61 |
| BJAB07104_00341 | YP_008207806.1 | Transcription antiterminator | Not tested | AbaR25 | Protein | 2e-56 | 61 |
