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Name : Patl_0563 (Patl_0563) Accession : YP_660146.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Virulence Product : KpsF/GutQ family protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : - Position : 652283 - 653254 bp Length : 972 bp Strand : + Note : KEGG: pha:PSHAa2546 D-arabinose 5-phosphate isomerase; TIGRFAM: KpsF/GutQ family protein; PFAM: CBS domain containing protein sugar isomerase (SIS) DNA sequence : ATGAGTCAGCAAGAGTATATTCAGTCAGCCCTGCGGGTGCTTGAAATTGAAGGTCAGGCAATCAAGCAGTTATCCCAATA TATTGACGACAATTTTATTGCAGCATGCGAGCTCATGAAAAACTGCAAAGGCAAAGTGGTTGTTTGCGGTATGGGTAAAT CTGGCCACATAGGGCATAAGATATCTGCGACATTAGCGAGTACGGGAACGCCTGCATTTTTTATGCACCCAGGGGAGGCA AATCACGGTGACCTAGGCATGCTTACAGAGCAAGATGTTCTGCTGGCGATTTCTAATTCAGGTGAAACATCTGAGCTATT GGCACTATTGCCTGTGGTGAAACGTCGTGGTATTGCCATTATTGCCATGTCGAATAACCCTGCTAGTTCGTTAGGTAAGC ACGCCGACGTCAATTTGTGTATTAAAGTTGAAAAAGAAGCTTGTTCTCTAGGCTTGGCGCCCACGGCGAGCACCACGGCA ACTTTAGTCATGGGAGATGCTCTGGCGGTGGCACTGTTAGATGCAAGAGGTTTCACGCCGGATGACTTTGCACTTTCTCA TCCTGGAGGTGCGCTTGGGCGCAAGCTTTTACTTAAGCTTGATGACATCATGTGCCAAGGGGATCTGATGCCTTTGGTTG GCACGACCCAAACGATTAGCCAGGCACTACTTGAAATTTCGCGCAAAGGGCTAGGAATGGCGGGTATCGTTGGCGATGAC GGGCGTTTGCTGGGTATTTTTACTGACGGTGATTTACGACGGGTACTGGATGCCAGAGTCGACATTCACACAGTCAGTAT TGAAAGTGTTATGACTGCTAATTGTGTTACAGCATCTCAAGAAACCTTGGCTGCTGAGGTGTTAAACGTCATGCAGAAAC GCAAAATCAGTTCACTGTTTATTGTTGATGACAATCACCTTCCGGTCGGTGCCATCAACATGCAAACCTTGTTATCAGCA GGAGTGATATAA Protein sequence : MSQQEYIQSALRVLEIEGQAIKQLSQYIDDNFIAACELMKNCKGKVVVCGMGKSGHIGHKISATLASTGTPAFFMHPGEA NHGDLGMLTEQDVLLAISNSGETSELLALLPVVKRRGIAIIAMSNNPASSLGKHADVNLCIKVEKEACSLGLAPTASTTA TLVMGDALAVALLDARGFTPDDFALSHPGGALGRKLLLKLDDIMCQGDLMPLVGTTQTISQALLEISRKGLGMAGIVGDD GRLLGIFTDGDLRRVLDARVDIHTVSIESVMTANCVTASQETLAAEVLNVMQKRKISSLFIVDDNHLPVGAINMQTLLSA GVI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 9e-51 | 43 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 6e-51 | 43 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 2e-50 | 43 |
