|
Name : Patl_0481 (Patl_0481) Accession : YP_660065.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : catalase Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG0753 EC number : - Position : 555911 - 557407 bp Length : 1497 bp Strand : + Note : PFAM: Catalase-like; KEGG: rru:Rru_A2489 catalase DNA sequence : ATGTCAGATAAACCAAGATTAACCACCAGTGCTGGTGCACCAGTTCCCTCAAATAGCACTTCAAGGTCGGCAGGCGAACG CGGACCGCTGCTGCTCACTGATTATCAACTGATTGAAAAACTAGCTCATCAGAACCGTGAACGTATCCCTGAACGCGCTG TTCACGCCAAAGGCTGGGGCTTGAAAGGCAAATTTACTGTTACCCATGATATTAGCCAATATTCTTGTGCGAAATTATTC TCCAACGTAGGCAAGACCACTGAAGTGTTAAGCCGTTGGTCTACAGTGGCAGGAGAGTCCGGCGCGGCAGATACAGAACG TGATGTACGTGGCTTTAGTCTCAAGTTTTATACCGAAGAAGGTAATTGGGATATGGTGGGTAACAATACCCCAGTATTCT TTATAAGAGACGGTTTCAAGTTTCCTGACTTTATCCGCACCCAAAAGCGCCACCCCAAAGCAAATTTACGCTCTCCTGAA GCCATGTTCGACTTCTGGGCGGCCCAGCCAGAATGCGTGCATCAAGTGACTATTCTTATGTCAGATCGTGGGATCCCAGT TAATCCGATGTACATGAACGGTTATGGTAGCCACACTTTTAGCATGTGGAATAAAGATGCTGAGCGCCACTGGGTTAAAT TTCACTTTAAAACACAGCAAGGCCATAAGCATTACACCAATGCTGAAGCAGAAGCGTTAACGGGCAAAACCCGAGAGGCT TATCAAGAAGACTTGTATAACGCGATAGAGGAAGGAAATTTCCCTAAATGGACCATGTACATTCAGGTTATGCCCGAGTT AGAAGCAGAGAATCAACCTTTCAACCCTTTTGACATCACAAAAATTTGGCCTCACGCTGACTTCCCACTTATTGAAGTGG GTGAGCTGGAAATGAATGAAAATCCTGAGAACTATTTTCAGATGGTTGAAAATGCAGCTTACAGTCCATCTAATGTAGTA CCTGGAATTGGCTATAGCCCAGACAAGATGCTACAGGCGCGCGTTTTCTCATACGCAGATGCTCATCGGTACCGCTTAGG GACGCATTATGAAGCTTTACCGGCCAATGTGGCTAAGGCATCTAACATACAGCATTATCATAAAGACGGTTCAATGCGTT TTTTCACCAATGACTTTGGTAACCCAGACGCCTACTATGAGCCAAATCAACATAATGGGCCCGTCGCTGATGCTAGCGTT GAAGAACCGCCGTTGCGTATTGACGGAGATGCCGCTCGCTACGAACAACAAGAGAGTGATGCCGATTATGTGCAGCCTAG GGCTTTGTATGAAATGTTTGATGATGCGCAAAAGCAGCGCTTATACGACAATTACGCGGCAGCGATGGGGCCTTGTTCCT CCTCGGTGAAAGAGCGTTGGTATGCAGTGTTAGAAAAAGTGCATCCAGAATATGCAAGAGGTGTGCGTTTAGCGAATGAC AATCTAGACAGTGACACAAATGCAGTACCGATTACCGATGACACACCTGTTAGATAG Protein sequence : MSDKPRLTTSAGAPVPSNSTSRSAGERGPLLLTDYQLIEKLAHQNRERIPERAVHAKGWGLKGKFTVTHDISQYSCAKLF SNVGKTTEVLSRWSTVAGESGAADTERDVRGFSLKFYTEEGNWDMVGNNTPVFFIRDGFKFPDFIRTQKRHPKANLRSPE AMFDFWAAQPECVHQVTILMSDRGIPVNPMYMNGYGSHTFSMWNKDAERHWVKFHFKTQQGHKHYTNAEAEALTGKTREA YQEDLYNAIEEGNFPKWTMYIQVMPELEAENQPFNPFDITKIWPHADFPLIEVGELEMNENPENYFQMVENAAYSPSNVV PGIGYSPDKMLQARVFSYADAHRYRLGTHYEALPANVAKASNIQHYHKDGSMRFFTNDFGNPDAYYEPNQHNGPVADASV EEPPLRIDGDAARYEQQESDADYVQPRALYEMFDDAQKQRLYDNYAAAMGPCSSSVKERWYAVLEKVHPEYARGVRLAND NLDSDTNAVPITDDTPVR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| katA | ABD94664.1 | catalase isozyme A | Not tested | ExoU island A | Protein | 5e-116 | 54 |
| katA | YP_005126717.1 | catalase | Not tested | Not named | Protein | 8e-94 | 47 |
| katA | YP_005684630.1 | catalase | Not tested | PiCp 3 | Protein | 2e-91 | 46 |
| katA | YP_005680448.1 | catalase | Not tested | PiCp 3 | Protein | 2e-91 | 46 |
| katA | YP_005682539.1 | catalase | Not tested | PiCp 3 | Protein | 2e-91 | 46 |
| katA | YP_003782575.1 | catalase | Not tested | PiCp 3 | Protein | 2e-91 | 46 |
