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Name : rph (Patl_4282) Accession : YP_663835.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : ribonuclease PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 5151224 - 5151937 bp Length : 714 bp Strand : - Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs DNA sequence : ATGCGCCCGAACGACAGAACCGCAAGCCAAATTCGCCCAGTTACTATTACCCGTAATTTCACTTGTCATGCAGAAGGTTC TGTATTGATTGAGTTCGGCAACACGAAAGTATTGTGCAACGCCTCTGTGACTGAAGGTGTGCCCCGTTTCATGAAAGGCC AAGGTAAAGGCTGGGTGAATGCTGAGTACAGTATGTTGCCACGTGCGACCCATACTCGTTCAGATCGTGAAGCGGCTCGT GGTAAACAAGGTGGTAGGACATTGGAAATTCAGCGGTTAATCGCTCGTTCGTTACGTGCCGCGCTTGATTTAAAACTGCT TGGCGAAAACACCATAGTTGTAGATTGTGATGTCATTCAGGCTGATGGCGGTACACGCACTGCATCCATCACTGGCGCGT GTGTGGCACTTGTTGATGCGCTTACATGGATGCGCAGCAAAGGGATCATCAAAACCAACCCTATGAAGCACATGATCGCG GCGATTTCTGTGGGTATATACAAGGGCAATGCGATTGCTGACTTGGAATACACAGAGGACTCAGAAGCAGAAACCGATAT GAATGTGGTGATGACCGATACGGGTAAAATGATCGAAGTACAAGGTACTGCTGAAGGCGAACCTTTTAGTATTGAAGAAA TGCATGAAATGCTAGAGCTGGCAAAACACGGTATCCGTGAATTGTTCGACGAGCAAAAAGCTGCACTTAACTAA Protein sequence : MRPNDRTASQIRPVTITRNFTCHAEGSVLIEFGNTKVLCNASVTEGVPRFMKGQGKGWVNAEYSMLPRATHTRSDREAAR GKQGGRTLEIQRLIARSLRAALDLKLLGENTIVVDCDVIQADGGTRTASITGACVALVDALTWMRSKGIIKTNPMKHMIA AISVGIYKGNAIADLEYTEDSEAETDMNVVMTDTGKMIEVQGTAEGEPFSIEEMHEMLELAKHGIRELFDEQKAALN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 6e-63 | 56 |
