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Name : Patl_3726 (Patl_3726) Accession : YP_663282.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : - Position : 4489191 - 4490510 bp Length : 1320 bp Strand : + Note : catalyzes the interconversion of D-xylose to D-xylulose DNA sequence : ATGGCTGAATATTTTAAAGATATCCCTAAAGTAAAATTTGAAGGTACCAGTTCAGACAACCCATTAGCATTTCGCCATTA CAACCCAGAAGAACTGGTGCTAGGCAAGAGCATGAAAGAACATTTACGCCTAGCGGCGTGTTACTGGCACAACTTCTGTT GGGACGGCGCTGATGTATTTGGCGCAGGTACGTTTAATCGCCCTTGGCTGCAAGCAGGTGATGCCATGCAGCGCGCAAAA GAAAAAGCTGACGTCGCGTTTGAGTTTTTCTCAAAGCTAAATATTCCTTATTACTGCTTCCACGATGTTGATGTTTCCCC TGAGGGCAACTCAATTAAAGAGTACATTAACAACTTTGCTCAGATGACTGACGTACTAGAAGCCAAACAAGAAGAAACGG GTCTTAAGTTGTTATGGGGCACCGCAAACTTGTTCAGTAACCCACGTTACGCTAGCGGTGCTGCATCTAGCCCGAACCCT GAAGTATTCACTTATGGCGCGACTCAAGTAATGCACGCTATGAATGCGACTAAGCGATTAGGCGGTGAAAACTACGTGCT TTGGGGTGGTCGTGAAGGTTACGAAACCTTGCTAAATACCGATTTACGCCAAGAGCGTGAGCAACTCGGTCGTTTCATGA ACATGGTTGTTGAGCATAAGCATAAAATTGGCTTTAAAGGATTATTGCTAATCGAACCTAAGCCACAAGAGCCGACTAAG CACCAGTACGATTACGACACCGCAACTGTTTATGGCTTCTTGAAGCAATACGGTTTAGAAAACGAATTTAAAGTGAACAT TGAAGCTAACCACGCCACCTTGGCCGGCCACTCGTTCCAGCATGAAGTCGCTACGGCTATATCACTTGGCTTATTTGGTA GCATCGATGCCAACCGAGGTGACCCTCAACTAGGTTGGGATACCGACCAATTCCCGAATAGCGTTGAAGAATTGTCATTG GTTATTTATGAAATTCTTAAAGCGGGTGGTTTTACATCTGGTGGCTTTAACTTTGATACTAAGTTGCGTCGTCAAAGCTC AGATCCACAAGATATGTTCATCGCCCACATTGGCGGCATGGATCACTTAGCAATTGGCTTGAAAAAAGCCGCGCTGATGA TTGAAAATGACTTCCTTGGTCAAGCTGTCAGCAAGCGTTACGCAGGTTGGAACGGCGAGCTAGGTAAGGGTATTCAAGGA GGCGATTTCAACCTTGAGTCACTCGCTAACCTCTGCGTAGATAAGAACCTACAACCTAAGCACGTCAGTGGCCAGCAAGA GTTATTAGAGAACAAGGTTAATAACGTTTTATACGGCTAA Protein sequence : MAEYFKDIPKVKFEGTSSDNPLAFRHYNPEELVLGKSMKEHLRLAACYWHNFCWDGADVFGAGTFNRPWLQAGDAMQRAK EKADVAFEFFSKLNIPYYCFHDVDVSPEGNSIKEYINNFAQMTDVLEAKQEETGLKLLWGTANLFSNPRYASGAASSPNP EVFTYGATQVMHAMNATKRLGGENYVLWGGREGYETLLNTDLRQEREQLGRFMNMVVEHKHKIGFKGLLLIEPKPQEPTK HQYDYDTATVYGFLKQYGLENEFKVNIEANHATLAGHSFQHEVATAISLGLFGSIDANRGDPQLGWDTDQFPNSVEELSL VIYEILKAGGFTSGGFNFDTKLRRQSSDPQDMFIAHIGGMDHLAIGLKKAALMIENDFLGQAVSKRYAGWNGELGKGIQG GDFNLESLANLCVDKNLQPKHVSGQQELLENKVNNVLYG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 2e-108 | 51 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 1e-108 | 51 |
