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Name : Patl_0353 (Patl_0353) Accession : YP_659938.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1200 EC number : - Position : 409608 - 411683 bp Length : 2076 bp Strand : + Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGTTAGGGCTAGCCCAGACGCCAGTCACCCAGCTAAAAGGGGTTGGCAGCAAAGTCGCTGAAAAGTTGGTTAAGCTTGG CCTGCAATCAGTGCAGGACTTGTTATTTCACTTGCCCCATCGTTATGAAGATCGGACCCGCATTTATCCCATCGCTGAGC TAATGCCGCATTTGCATACCAGTGTCGAAGGCGAAGTCATGTCTAGCGATGTGCAGTTTGGCCGTAAACGCATGCTAATA GTGCGGATCAGCGACGGCACAGGCACCATCACATTACGCTTTTTTCATTTTTCAGCGGCGCAAAAAAACAGCTTAGAAAA CGGTACACGCATTCGTTGTTTCGGTGAGGTACGTGCGGGCAAATATGGCCTAGAGATCATGCACCCAGAATATAAAACCA TTAGTGCAGATTCCAACGCCCAGTTGGCTGAATCTTTAACGCCAGTTTATCCCTCTACTGAGGGCGTCAAACAAATTACC TTGCGTAATTTGACCGAGCAAGCCCTCACATTGCTTGATAAAGGCGGTTTAGCTGAATTGCTACCTGAGGATGTTTATCA GCAGCAAGTCGGTTTAATTGAAGCTTTACATTTAGTACACAGGCCTCCTCCTGATGTGACGCTGGCTTTACTTGAGGAAG GTAAGCACCCCGCTCAGCAGCGCTTAGCGCTAGAAGAGCTATTGGCCCATCACTTAAGTGTGCTTAAAGTACGCCAGCAA AGTCAGTTGCAAAAAGGCTTTGCTATCACCCCAAGTGAGCCCCTGCTGAAACAGCTACTCGATAGCTTGCCATTTGATTT AACGGGTGCCCAGCAACGTGTTATCAACGACATTCAACACGATATGCAGCGCCCAACCCCCATGATGCGTTTAGTGCAAG GGGACGTAGGGTCAGGTAAAACACTGGTCGCTGCCATGGCTGCGCTATCAGCGATCAGTGCAGGCTACCAAGTGGTTATG ATGGCGCCTACTGAGCTGCTGGCAGAACAACATATGAACAATTTTCAAGGTTGGTTTGCTCCCCTAGGTATCGAGGTCGG CTGGCTGGCCGGTAAGTTAAAAGGTAAAGCTCGTAACGAAACCCTAGAAAATTTAGCCAGCGGCAAGCTGCAGTTACTGG TAGGCACTCACGCTGTGTTTCAAGAGACCGTACAATACCAATCCTTGGCACTGGTCATTGTGGACGAGCAACACAGATTC GGGGTGCATCAGCGCTTGGCATTGCGTGAAAAAGGCGTGCAGCAGGGGGCGTTTCCTCATCAGTTGATCATGACTGCAAC GCCCATTCCACGCACACTAGCGATGACAGCCTATGCAGATCTAGACACTTCGGTAATCGACGAGCTACCGCCCGGACGCA GGCCTATTACCACTGTGGTATTGCCCGAAACGAGACGCATAGAAGTGGTTGAACGGGTGCGCTTGGCGACTGTAGAGCAA GGCAGGCAAACCTATTGGGTATGCACCCTGATTGAAGAATCAGAAGTGTTGCAGTCTCAAGCGGCAGAAGAAACCGCTAT TGCCTTAGCAACAGCCTTGCCTGAACTAAAGGTTGGTTTAGTGCACGGGCGCCTTAAAGCCGATGAAAAGCAGCGTTTAA TGCAGCAATTTAAAGACGGCGAGATGGACTTATTGGTGGCTACCACCGTAATCGAGGTCGGGGTCGATGTGCCCAACGCC AGTTTGATGATCATCGAAAACCCAGAACGTTTAGGTTTAGCGCAATTACATCAACTTCGCGGGCGAGTTGGGCGAGGCTC AGTAGAAAGCCACTGCGTGTTGATGTATCAAAGCCCTTTGTCAAAGACGGCAGCAAAGCGATTAGCTGTGCTGCGTGAAT CCCATGATGGTTTTTATATTGCCCAACAAGATTTAGAGATACGTGGCCCAGGTGAACTGTTGGGTACCAAGCAAACCGGC TTGGCTGACTTGCGTATCGCCGATTTGGTGCGTGACGCCGAGCTTATTCCTCAGGTACAAACCTTGTCTGTAAAATTATG GGAACAACATCCTGCAAATGCACAAGCCATTATTAATCGCTGGTTAGGTCACAAAGAGCATTTTGGTCATGCCTGA Protein sequence : MLGLAQTPVTQLKGVGSKVAEKLVKLGLQSVQDLLFHLPHRYEDRTRIYPIAELMPHLHTSVEGEVMSSDVQFGRKRMLI VRISDGTGTITLRFFHFSAAQKNSLENGTRIRCFGEVRAGKYGLEIMHPEYKTISADSNAQLAESLTPVYPSTEGVKQIT LRNLTEQALTLLDKGGLAELLPEDVYQQQVGLIEALHLVHRPPPDVTLALLEEGKHPAQQRLALEELLAHHLSVLKVRQQ SQLQKGFAITPSEPLLKQLLDSLPFDLTGAQQRVINDIQHDMQRPTPMMRLVQGDVGSGKTLVAAMAALSAISAGYQVVM MAPTELLAEQHMNNFQGWFAPLGIEVGWLAGKLKGKARNETLENLASGKLQLLVGTHAVFQETVQYQSLALVIVDEQHRF GVHQRLALREKGVQQGAFPHQLIMTATPIPRTLAMTAYADLDTSVIDELPPGRRPITTVVLPETRRIEVVERVRLATVEQ GRQTYWVCTLIEESEVLQSQAAEETAIALATALPELKVGLVHGRLKADEKQRLMQQFKDGEMDLLVATTVIEVGVDVPNA SLMIIENPERLGLAQLHQLRGRVGRGSVESHCVLMYQSPLSKTAAKRLAVLRESHDGFYIAQQDLEIRGPGELLGTKQTG LADLRIADLVRDAELIPQVQTLSVKLWEQHPANAQAIINRWLGHKEHFGHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 2e-89 | 43 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Patl_0353 | YP_659938.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 0.0 | 58 |
