Gene Information

Name : Patl_3533 (Patl_3533)
Accession : YP_663089.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Unknown
Product : glycerol kinase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG0554
EC number : -
Position : 4239824 - 4241317 bp
Length : 1494 bp
Strand : +
Note : TIGRFAM: glycerol kinase; PFAM: carbohydrate kinase, FGGY; KEGG: gox:GOX2090 glycerol kinase

DNA sequence :
ATGCGGATCAAAGATTGTATATTAGCTATTGACCAAGGTACTACTTCAACACGAGCCATTATTTTTGCGCCCGACTCGAG
CATTATTGCCGTAGCCCAACAAGAATTCACTCAGCATTACCCAAATGATGGTTGGGTAGAACATGACCCAGAAGATATTT
GGTCATCAACCGTTGTGGTATGTCGCCAAGCTATTTCAGAAGCAATAGCAAAAGGCGCCCGTATCGCAGCGATTGGCGTT
ACGAATCAACGTGAAACTACGGTCGTGTGGGATAGAAACACAGGCCAAGCTATTTACAACGCCATTGTATGGCAAGATAG
ACGCACCGCAAAAACGTGCCGAGAAATGCAAGACAAAGGCTTGTTTGACGTGGTGAATTCACGCACAGGTTTATTGCTTG
ACCCATATTTTTCCGCCTCAAAGGTCGCATGGATTTTAGATAATGTTGAAGGGGCTCGTGAAAAAGCAGACGCCGGAGAC
TTGGCTTTCGGTACGATTGATTCGTTTTTGATCTGGCGGTTAACAGACGGACAGGTGCACGCCACTGATGTGACCAACGC
CAGTCGCACCAACTTATTCAATATCCATGACATGGCATGGGATCCAAAACTGCTAGAGGTCTTCAACGTCCCTAAATCAG
TGTTACCCATGGTCAAAGAATGCGCTGATGACTTTGGCCATACTACCGAAGATTTATTCGGCTTTTCCTTGCCAATCCTA
GGTGTTGCAGGAGACCAACAGGCCGCCAGCATTGGGCAATGTTGCTTCAAAGAAGGGGCGATAAAGAGCACCTATGGTAC
TGGCTGTTTTGTCATGCTAAATACAGGCACCAAAGCCTTTAACTCTAAAAATAAACTGCTCACGACCGTGGCTTACACCA
TTAAAGGTGAAACCCATTATGCCCTTGAAGGCTCAATTTTTATTGCTGGCGCTGCCATTCAATGGCTGCGTGATGGTTTA
GGCGTCATTAAAAGTGCTTCAGAAACTGAAGACTTAGCCAAGTCATTGGATGACGATCATGGTGTATACATGGTGCCGGC
CTTTGCAGGACTAGGCGCGCCACATTGGGCGCCAGATGCTCGCGGTGCCGTATTCGGTTTAACTCGAGGCACCACTAATG
CACACTTCGTGCGCGCGGCCCTTGAGTCAGTGTGTTATCAAACCTCAGATTTGCTGCATGCCATGGCAGAAGATGGCGTA
TCACTGGATAAGATTCGCGTCGATGGCGGTATGGTTGGCAATAACTGGTTATGCCAATTCTTGGCTGGCATTTTAGATGT
CACAGTAGAGCGGCCTAAAATCATGGAAACCACAGCCCTAGGCGCGGCTTATCTTGCCGGTCTTAAAGCGGGCATCTACG
CGTCATGTGAGCAGCTAGCCAGTATGAACGAAGTAGAAAGCAGCTTTGACGCTAAAATGCCTTCTTCTCAGCGCCGAAAA
TTAATTGCGGGCTGGGAAAACGCGGTACAAAGCACATTAGGTTATACGAAATGA

Protein sequence :
MRIKDCILAIDQGTTSTRAIIFAPDSSIIAVAQQEFTQHYPNDGWVEHDPEDIWSSTVVVCRQAISEAIAKGARIAAIGV
TNQRETTVVWDRNTGQAIYNAIVWQDRRTAKTCREMQDKGLFDVVNSRTGLLLDPYFSASKVAWILDNVEGAREKADAGD
LAFGTIDSFLIWRLTDGQVHATDVTNASRTNLFNIHDMAWDPKLLEVFNVPKSVLPMVKECADDFGHTTEDLFGFSLPIL
GVAGDQQAASIGQCCFKEGAIKSTYGTGCFVMLNTGTKAFNSKNKLLTTVAYTIKGETHYALEGSIFIAGAAIQWLRDGL
GVIKSASETEDLAKSLDDDHGVYMVPAFAGLGAPHWAPDARGAVFGLTRGTTNAHFVRAALESVCYQTSDLLHAMAEDGV
SLDKIRVDGGMVGNNWLCQFLAGILDVTVERPKIMETTALGAAYLAGLKAGIYASCEQLASMNEVESSFDAKMPSSQRRK
LIAGWENAVQSTLGYTK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glpK YP_005139160.1 glycerol kinase Not tested Not named Protein 1e-95 48