|
Name : Patl_3521 (Patl_3521) Accession : YP_663077.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : UDP-N-acetylmuramoylalanine--D-glutamate ligase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0771 EC number : - Position : 4226982 - 4228307 bp Length : 1326 bp Strand : - Note : TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; PFAM: cytoplasmic peptidoglycan synthetases-like Mur ligase, middle region; KEGG: hin:HI1136 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase DNA sequence : ATGGCTGCTAATCCATTAGCAAATAAAAATATCATCGTAGTTGGACTCGGTTTGACCGGTTTGTCCTGCGTGAGATTTTT AGTCGCTAAAGGTGCCAATGTGAGCGCAGTGGATACCCGTGCAGATTTGGAAGTCAGTGTATCCGTTCCTGTGTTTCTCG GTGAACTGGATAGCGCCCGTTTGTGCGCCGCAGACATGCTGGTAGTCAGCCCAGGTTTGAGTTTGAAAACACCGGCCATC AATGCCGCCATTGACGCGGGCGTGCAGGTAATTGGCGACATCGAACTGTTCGCCATGTTCAACAATACACCTGTATTAGC GGTTACCGGCTCTAATGGTAAATCTACGGTGGCAACACTTGCCTACGAGATGTGTTTAGCGGCAGGTAAAAAAGCGTTAT TAGGGGGGAATATTGGTATTCCTGCCCTCGAATTGTTAGAAAAAGACGCTGACATTATTGTTTTAGAGCTATCGAGCTTT CAGCTGGAAACCACCTATACCTTGCGCCCTCACGTGGCTTGCATGTTAAATCTCAGTGATGATCATTTGGATCGCCACGG AGATATGCTGAGCTATCAGCGCGCAAAACTGCGGATATATCGCGATGCACGATTCAGCGTGTGTAACCGTGACGACGCTG CCACATGGCCTATGACGATTAATCCTGATGTCATGTTTGGTTTGAGTAGCAGCGAACGTGGCCTGAGCTGGAATAAAGAC ACCGCGCATATTTTACTGGACGGTAAAGACTTCCTTGATAGCCATGCCTGCATGTTGGTAGGCGAGCATAATATGCTCAA TATTCAAGCTGCCACTGCCATGGCGATGTTGGCGGGTATTGATCTTACTGCCATTAAGCTTGCAGCAACCAGCTTTGCAG GTCTGGCACATCGCTGTCAAACCGTGGCGGTGAGTCATCATGTGCGTTGGATAAATGATTCCAAAGCAACCAACGTTGGC GCCACTATTGCCGCCATCGATGGCCTATCACCGACCTGTAAAGGCAAATTGATCCTTATCGCGGGTGGCGACGGGAAAGG AGCTGATTTCTCGCCACTGGAAGAGCGGTTCAACGTACAAGTAAATGAGTTAATTACCCTAGGTAAAGATGGTCCTAAGT TGGCTGAATTAAAGGCAAACAGCCATCAGGTTGCAACCTTAGACGATGCAGTGCAATTGGCTGCTACGTTAGCAGAGGGC GACGCGACCGTGTTGCTGTCACCTGCTTGCGCTAGCTTGGATATGTTTAAAAACTATCAGCAACGCGGCGACTTATTCGT AAAAGCGGTAAACACTCTGGTAGCTAAGCAAGGAGGTCAGCGATGA Protein sequence : MAANPLANKNIIVVGLGLTGLSCVRFLVAKGANVSAVDTRADLEVSVSVPVFLGELDSARLCAADMLVVSPGLSLKTPAI NAAIDAGVQVIGDIELFAMFNNTPVLAVTGSNGKSTVATLAYEMCLAAGKKALLGGNIGIPALELLEKDADIIVLELSSF QLETTYTLRPHVACMLNLSDDHLDRHGDMLSYQRAKLRIYRDARFSVCNRDDAATWPMTINPDVMFGLSSSERGLSWNKD TAHILLDGKDFLDSHACMLVGEHNMLNIQAATAMAMLAGIDLTAIKLAATSFAGLAHRCQTVAVSHHVRWINDSKATNVG ATIAAIDGLSPTCKGKLILIAGGDGKGADFSPLEERFNVQVNELITLGKDGPKLAELKANSHQVATLDDAVQLAATLAEG DATVLLSPACASLDMFKNYQQRGDLFVKAVNTLVAKQGGQR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 2e-70 | 42 |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 2e-70 | 42 |
