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Name : Patl_3475 (Patl_3475) Accession : YP_663031.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Resistance Product : anaerobic nitric oxide reductase transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG3604 EC number : - Position : 4172076 - 4173665 bp Length : 1590 bp Strand : + Note : Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon DNA sequence : ATGATGGAACTTAATTCAACGCTTCTGTTAGAAGTGGCATTAGATCTCGCCAACAGCATCACCAATGAAGATAGGTTCGA CAGATTGCTATCCTCGATTAGAAAAGCAATTAATTGCGATGCAGTTGTATTGTTGGTCTACCAAGGCGAACAACTTAAAC CATTGGCAATACAAGGGCTGGCAACCGATACTCTTGGGCGGCGTTTTAACCTCAGCGATCACCCTCGCCTTTCGCTCATT TGCTCAGGAAGTCAGCCGGTGCGCTTTGCATCAGATTCCCCATTACCTGATCCTTACGATGGCTTGTTGCTCGCAAAAGA AGGCGACTTACCCGTGCATTCGTGTATGGGTTTGCCCTTGTATAGCGACAATCAACTGATGGGCGTCGTGACCCTTGATA GTCTCAGCCCTGAAGCCTTTTCAGAAATCCCCGAGCGAACATTGCAGCTAATCACTGCGCTGTCAGCCGCCACATTGAAA ACGGCTATGCAACTGAGTGGGTTGGAACAGCGCGCACAACAAGCACACGATTTAGTGCAAGAACTTACGAACGAAGCACT AACACGAGATGGTGGCGAGTTAATCGGCAATAGTCCTAGTATGCTCGCCCTTAAAAGTGATATTCAGTTGGTCGCGGGCT CTGACTACACTGTGCTGATATTGGGCAAAACAGGCGTGGGTAAAGAATTGGTTGCCCGAACATTGCATCAACGTTCTAAT CGAGGGACCCAGCCTTTGGTGCACGTTAACTGTGCCTCGATTCCGGAAACCTTGGCGGAAAGTGAATTGTTTGGTCACGG AAAAGGTGCGTTCAGCGGCGCCGAAAAAGAGCGCGCCGGCAAATTCCAATTAGCCGATGGAGGCACGATATTTTTAGATG AAATTGGTGAATTGCCCTTAAGCGTGCAAAGTAAATTATTACGCGTGTTGCAAAGTGGCGAGATTCAGCCTGTAGGAAAG GATCAAGTATCAACAGTCAACGTACGCGTAGTAGCCGCGACTAACCGAGACTTAGCACAAGAAGTTAAAACTGGGCGTTT TAGAGCTGATCTTTATCATCGCCTCTCCGTGTACCCTATCAACGTGCCGGAACTAAAAGAGCGCGGAGATGACGTATTGT TACTCGCAGGTTATTTCTTAGAAGTGACCGCTCGCAAGCTAGGTATTCGCCAACTAAAAATCCCAAACGACGTACAACAG GCCCTAATTGCCTATTCTTGGCCTGGCAATGTAAGGGAATTAGAACACGTCATCAGTCGTGCCTCTTTGAAGGCAACGCG CAGTAAGAATCAACACAACATTATCTCACTTAGCACAGAAGATTTAGACTTTGAGCGTGGAATGCCGTCAAAGATCAACC TGAATCAACCAATCCAAGTGAGGGAAGTATTAGGCAGTAGCGAAGCACAGAGTCTTAAAACAATGACGGAAGCTTTTCAA GCTCAGATGATCAGCCGCACTTTGAGTGAGCATCAAGGCAATTGGACGTTGGCCGCTAAACAATTAGAGATGGACAGGGC CAACCTTGCACGATTGGCAAAGCGGCTCGGCGTACACGTACAGAAAAACGTGAACAATCAAGCATTTTGA Protein sequence : MMELNSTLLLEVALDLANSITNEDRFDRLLSSIRKAINCDAVVLLVYQGEQLKPLAIQGLATDTLGRRFNLSDHPRLSLI CSGSQPVRFASDSPLPDPYDGLLLAKEGDLPVHSCMGLPLYSDNQLMGVVTLDSLSPEAFSEIPERTLQLITALSAATLK TAMQLSGLEQRAQQAHDLVQELTNEALTRDGGELIGNSPSMLALKSDIQLVAGSDYTVLILGKTGVGKELVARTLHQRSN RGTQPLVHVNCASIPETLAESELFGHGKGAFSGAEKERAGKFQLADGGTIFLDEIGELPLSVQSKLLRVLQSGEIQPVGK DQVSTVNVRVVAATNRDLAQEVKTGRFRADLYHRLSVYPINVPELKERGDDVLLLAGYFLEVTARKLGIRQLKIPNDVQQ ALIAYSWPGNVRELEHVISRASLKATRSKNQHNIISLSTEDLDFERGMPSKINLNQPIQVREVLGSSEAQSLKTMTEAFQ AQMISRTLSEHQGNWTLAAKQLEMDRANLARLAKRLGVHVQKNVNNQAF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| norR | ABD94719.1 | putative nitric oxide reductase transcriptional regulator | Not tested | ExoU island B | Protein | 3e-115 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Patl_3475 | YP_663031.1 | anaerobic nitric oxide reductase transcriptional regulator | BAC0467 | Protein | 8e-59 | 41 |
