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Name : Patl_3456 (Patl_3456) Accession : YP_663012.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : type III restriction enzyme, res subunit Function : - COG functional category : K : Transcription COG ID : COG1061 EC number : - Position : 4147128 - 4148921 bp Length : 1794 bp Strand : - Note : PFAM: helicase-like type III restriction enzyme, res subunit DEAD/DEAH box helicase-like; KEGG: spt:SPA0627 putative helicase DNA sequence : ATGAGCCAAGCATTCATATTACGTGATTACCAAACGCAAGCGGTTGATGCCGCCCTAGCGCATTTTCGGCAAAGCGATGA CCCCGCAGTGATTGTATTGCCGACGGGGGCAGGCAAAAGTTTGGTTATTGCCGAGTTGAGTCGATTAGCAAAAGGCCGTG TTATCTGCCTTGCTCATGTCAAAGAGTTAGTGGAGCAAAATCACGCTAAGTTTCTTGCTACCGGCTCGTCGGCAGGACTC TTTTCAGCTGGCTTAGGCCAAAAAGACAGCAACCTGAAAACGACCTTCGCTAGTATTCAGTCGCTGTCTGCAAACTTAGA GGCTTTTGACGCTCCTGCTAGCTTAATTATTATTGATGAATGTCACCGAGTAGGGCTAGCAGACAGCGCTCAATACAATA AAACCCTGGAACATTTTCGCCGTTTAAATCCAAAGGTAAAAATGCTTGGCTTAACCGCTACTCCTTATCGACTAGGCAGT GGTTGGATTTATCAGCATCACTACCATGGTTATACACGGCCCTCAGCCCAATCTTTTTTCAAAAAATGTATTTTTGAGCT TCCTTTGCAATACATGGTCAAAAACCATTATTTAACGCCGCCCATTCATTATGATGCCGCCGTTGCTCATTATGATTTTA GTTTGCTAACAGAAAGTTTGGACGGCGAGCAAAATACCGATGACATCGCATTAAATGAACTCATTGATAAACACCCTAGA GTGACTAAGGCCGTGACCGAGCAAATACTACAGCTTAGTCAGGACCGCCAAGGCGTCATGATTTTTGCCGCCACTATCGA TCACGCAAAAGAAATTTGCGGTTACTTACCCCCACAGCAAACCGCCTTAATCACCGGCACCACAAAAATAAAGCAACGTG ACACGCTCATCGCTGCCTTTAAAGCTAAACACATTAAGTACTTAGTGAATGTATCTGTATTAACCACAGGCTTTGATGCG CCCCACGTAGACGTGATTGCCATTTTGCGGCCCACACAATCGATCAGTTTATTTCAACAAATTGTCGGGCGCGGCTTGCG CCTAAGCCCAGGCAAAAAGGACTGCTTAGTGTTGGATTACACCAATAATGGTTACGATATTTTTCAGCCTGAAATTGGCG AAAAAAAGCCAACGCCAGATTCTGTTGCCGTGCAAGTACATTGCCCACAATGCGGTTTTGCTAATGCATTTTGGGGGAGA AAAGACGCAGAGGGTCACATACTTGAGCATTTTGGTCGCCGCTGCCAAGGCTTGATTGAAAGCCCTGACGCCTCTGATAG CCCAAACACCGTCGATGGCCCACAACTCACAATGCAATGCAGCTATCGCTTTCGCTTTAAACACTGCCCCTATTGCAATC AGGAGAACGACATTGCTGCCAGACAATGCCATCACTGCAATGAGAAGCTCATCGACCCTGACGACATATTGAGAAAGGCG TTAAATTTAAATAATAATAAAGTGCTACGCTGCGCCGCCATAACGCCTGTGATCAACCAGGCGGACAAGAGCATAAAAAT CACCTACCACGATGAAGATGGTCTAACACTATCAGAAACCTTTCGCTTCAATTATAAAAAAGCGCGACAACGCTTTAATG ATTTATTCGCCCGAAGATTAGCCAGCGCCACCCAGTCAATTCATTTCGAATCCATTGAAGAGTTGCAACCGTTTTTGCCC TATCTACCAACACCTGACTTTGTGATCGCCAAAAAGCAAAAACACCACTGGCAAGTCACCGAACGATTATTTGATTACCA AGGGCCATATCGCAAGGCCAATGCCCTTGGCTAG Protein sequence : MSQAFILRDYQTQAVDAALAHFRQSDDPAVIVLPTGAGKSLVIAELSRLAKGRVICLAHVKELVEQNHAKFLATGSSAGL FSAGLGQKDSNLKTTFASIQSLSANLEAFDAPASLIIIDECHRVGLADSAQYNKTLEHFRRLNPKVKMLGLTATPYRLGS GWIYQHHYHGYTRPSAQSFFKKCIFELPLQYMVKNHYLTPPIHYDAAVAHYDFSLLTESLDGEQNTDDIALNELIDKHPR VTKAVTEQILQLSQDRQGVMIFAATIDHAKEICGYLPPQQTALITGTTKIKQRDTLIAAFKAKHIKYLVNVSVLTTGFDA PHVDVIAILRPTQSISLFQQIVGRGLRLSPGKKDCLVLDYTNNGYDIFQPEIGEKKPTPDSVAVQVHCPQCGFANAFWGR KDAEGHILEHFGRRCQGLIESPDASDSPNTVDGPQLTMQCSYRFRFKHCPYCNQENDIAARQCHHCNEKLIDPDDILRKA LNLNNNKVLRCAAITPVINQADKSIKITYHDEDGLTLSETFRFNYKKARQRFNDLFARRLASATQSIHFESIEELQPFLP YLPTPDFVIAKKQKHHWQVTERLFDYQGPYRKANALG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ESA_01052 | YP_001437156.1 | hypothetical protein | Not tested | Not named | Protein | 3e-160 | 53 |
