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Name : hemC (Patl_0342) Accession : YP_659927.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : porphobilinogen deaminase Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0181 EC number : - Position : 400636 - 401565 bp Length : 930 bp Strand : - Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis DNA sequence : ATGTCAGATCGCGTTATTCGAATTGCTACGCGCAAAAGTGCTTTAGCCATGTGGCAAGCAGAATATGTTCAAGCCAAATT ACTTGAAGCTCATCCCCAACTTAAGGTGGAATTGGTGCCTATGTCGACACAGGGCGACCGGATTTTGGATACGCCATTAG CCAAAATTGGCGGCAAAGGCCTGTTTATTAAAGAGCTCGAAGTCGCCATGAGCGAAGGCCGCGCAGATATAGCGGTGCAT TCAATGAAGGACGTACCCGTTGATTTCCCAGCAGGCTTTGGCTTGCATTGCATATGCGAACGGGAAAACCCCTATGACGC ATTTGTATCAAACACCTATGCCAGCATCGAAGAATTGCCGCAAGGCGCAATAGTCGGTACTTCAAGTTTGCGCCGTCAGT GCCAGATTCGCAGCGCCCGCCCAGATTTAACCATTCGTGACCTGCGCGGTAACGTTAACACGCGTTTAGCCAAATTAGAT GACGGCCAATACGATGCCATTATTCTGGCCGCTGCTGGCTTGATCCGCCTTGAAATGCAAGATCGCATCAAAACCTATAT CGAACCTACTGTGTCCCTGCCCGCTGTTGGCCAAGGTGCTGTAGGCATTGAATGTCGTAACGATGACGCTGAGCTAATCG AATTACTCAAGCCGCTAAATCACAGCGACACCGAATCACGCGTTAAAGCCGAACGCGCCATGAACGCCAAATTAAATGGC GGGTGCCAAGTGCCTATCGGCAGTTATGCCGTCTTAAACGGTGACGAACTGTATCTACGTGGATTAGTCGGCTCACCCGA TGGCAGCGTACTTTTGCAGGCTGAGAAACGTGGCAATGTGAATGATGCGCTTAGCATCGGCGTTGATGTGGCTGAGCAAT TGCTTGAAAAAGGCGCGGGTGACATTCTTCAGGCACTATATAAAGATTAA Protein sequence : MSDRVIRIATRKSALAMWQAEYVQAKLLEAHPQLKVELVPMSTQGDRILDTPLAKIGGKGLFIKELEVAMSEGRADIAVH SMKDVPVDFPAGFGLHCICERENPYDAFVSNTYASIEELPQGAIVGTSSLRRQCQIRSARPDLTIRDLRGNVNTRLAKLD DGQYDAIILAAAGLIRLEMQDRIKTYIEPTVSLPAVGQGAVGIECRNDDAELIELLKPLNHSDTESRVKAERAMNAKLNG GCQVPIGSYAVLNGDELYLRGLVGSPDGSVLLQAEKRGNVNDALSIGVDVAEQLLEKGAGDILQALYKD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00327 | YP_008207792.1 | Porphobilinogen deaminase | Not tested | AbaR25 | Protein | 1e-82 | 63 |
| BJAB0868_00331 | YP_008211657.1 | Porphobilinogen deaminase | Not tested | AbaR26 | Protein | 1e-82 | 63 |
