Gene Information

Name : Patl_3397 (Patl_3397)
Accession : YP_662957.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Resistance
Product : protein tyrosine phosphatase
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0394
EC number : -
Position : 4072162 - 4072686 bp
Length : 525 bp
Strand : -
Note : PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: ppu:PP1928 arsenate reductase

DNA sequence :
ATGGCATTTTGTTTGAATGATGTGTTTTACCCTAAAAGCAAAGCGAGGATCACCTTGAAAGTCTTATTTATATGTACCCA
CAACCGTTGCCGTAGCATTTTATCAGAAGCGATCACTAACCATGCTAGCCAAGGCAAGATTGAGGCGCAAAGCGCTGGCA
GCCAACCGGTAGGTGAGGTACACCCATTATCAATTAAATACTTACAAGAAGCGGGTATCAGTACCGAAGGATTGATTAGT
CAATCATGGGACGAGTTTGAAGATTTTGCTCCTGATGTGGTGATCACCGTTTGTGACAACGCAGCGGGCGAGACCTGCCC
GCTTTGGTTTGGCAAAAGTGTCAAAGTACACTGGGGCTTAGCTGATCCGTCTAAATTATCCGGTAGCGAAGATGAAATAG
CGCAAGCATTTCGCGCCACCATTGATGAAATTACTCAGCGCGTAAATGCCATGCTCAATGTCGATGTTGATACCCAAGAC
CAAGAAGCGTTACGCGAAGCATTTCAAGCGTTGGGAGCTCAGTAA

Protein sequence :
MAFCLNDVFYPKSKARITLKVLFICTHNRCRSILSEAITNHASQGKIEAQSAGSQPVGEVHPLSIKYLQEAGISTEGLIS
QSWDEFEDFAPDVVITVCDNAAGETCPLWFGKSVKVHWGLADPSKLSGSEDEIAQAFRATIDEITQRVNAMLNVDVDTQD
QEALREAFQALGAQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsC CAJ77017.1 arsenate reductase Not tested AbaR1 Protein 3e-28 48
arsC AFC76434.1 ArsC Not tested AbaR5 Protein 4e-28 48
BCAM0234 YP_002232865.1 putative arsenate reductase Not tested BcenGI11 Protein 7e-24 46