Gene Information

Name : Patl_3363 (Patl_3363)
Accession : YP_662923.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Unknown
Product : aspartate-semialdehyde dehydrogenase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0136
EC number : -
Position : 4035445 - 4036461 bp
Length : 1017 bp
Strand : -
Note : KEGG: ilo:IL1019 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD - binding Semialdehyde dehydrogenase, dimerisation region

DNA sequence :
ATGTCTCGGTCTTTTGATGTCGCCGTGTTGGGTGCTACTGGTTTAGTAGGACAACACATGATTGAAATTCTTGAACAAAG
AGGATTTCCAGTCAATAAACTTTACCCATTGGCAAGTTCACGTTCTGCTGGTGGTACGGTGACGTTTAAGGGTGAAGAAG
TAACTGTGCTAGACGCAGATACTTTTGATTGGAGCCTAGTGCAATTGGGTTTCTTTTCAGCAGGCGGCAGTGTTTCTGAG
AAATTTGCACCTATCGCTGCAGAAGCAGGTTGCGTGGTTATCGATAATACATCGCACTACCGTTATGAACCGGATATCCC
TCTAGTGGTGCCGGAAGTGAATGCTCATGCATTGGCTGATTTTCGTAACCGCAACATCATCGCTAACCCTAACTGTTCAA
CCATCCAAATGATGGTAGCACTTAAACCAATCCACGACGCAGTGGGTATTGAGCGCATTAACGTGTGCACTTACCAGTCT
GTATCAGGTGGCGGGAAAGAATCTATGGATGAATTGGCGAAGCAAACTGCCGCGCTCCTAAACGGGCAAGAAGCAAAGCC
TGAAGCGTTTAGTCGTCAAATCGCGTTTAACGTAATTCCGCAAATAGATGTGTTTTTAGATAACGATTACACCAAAGAAG
AAATGAAGATGGTGTGGGAAACCCAGAAAATCTTGGGTGACGAAAGCATTCGTGTGAATGCCACCGCAGTGCGTGTTCCG
GTATTCTATGGCCACGGTGAAGCGATACACATAGAAACGCGTACTCCGATTGATGCACAAGATGCGAAAAACTTATTGGC
TGAAGCGCCGGGTATTGTTCTAAAAGCAGACCCAGCCGACTTTCCTACTCAAGTAAGTGATGCGAGCGGAAACGATGATG
TTCACGTTGGGCGCGTTCGTAACGACATTAGCCACCCCAATGGCCTGAATATGTGGGTTGTTTCTGATAACGTGCGCAAG
GGCGCTGCTACTAACAGTGTTCAAATTGCAGAGGTGCTTATTCGCGATTACATGTAA

Protein sequence :
MSRSFDVAVLGATGLVGQHMIEILEQRGFPVNKLYPLASSRSAGGTVTFKGEEVTVLDADTFDWSLVQLGFFSAGGSVSE
KFAPIAAEAGCVVIDNTSHYRYEPDIPLVVPEVNAHALADFRNRNIIANPNCSTIQMMVALKPIHDAVGIERINVCTYQS
VSGGGKESMDELAKQTAALLNGQEAKPEAFSRQIAFNVIPQIDVFLDNDYTKEEMKMVWETQKILGDESIRVNATAVRVP
VFYGHGEAIHIETRTPIDAQDAKNLLAEAPGIVLKADPADFPTQVSDASGNDDVHVGRVRNDISHPNGLNMWVVSDNVRK
GAATNSVQIAEVLIRDYM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDB402_0195 YP_005126708.1 aspartate-semialdehyde dehydrogenase Not tested Not named Protein 6e-48 41