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Name : Patl_3330 (Patl_3330) Accession : YP_662890.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0021 EC number : - Position : 3993777 - 3995777 bp Length : 2001 bp Strand : - Note : TIGRFAM: transketolase; PFAM: Transketolase-like Transketolase, central region; KEGG: son:SO0930 transketolase DNA sequence : ATGCCTTCACGTCAACAACTCGCTAACGCAATACGTGCGCTTAGTATGGATGCAGTACAACAGGCTAATTCAGGACACCC AGGCGCCCCAATGGGCATGGCGGATATAGCCGAAGTATTGTGGAACGATTTTTTAAAGCACAATCCGGCGAATCCAAACT GGGCTAACCGCGATCGCTTTATTATGTCTAACGGCCACGGTTCGATGTTAGTTTACTCATTGTTGCATTTGACCGGTTAT GAGTTACCCATTGAAGAGTTGAAAAACTTCCGTCAATTGCATTCTAAAACACCAGGCCACCCAGAGTATGGCTACGCGCC AGGCGTTGAAACAACCACTGGCCCACTAGGTCAAGGCATCAGTAATGCAGTCGGTATGGCGATTGCTGAGAAAATGTTGG CAGCGCAATTCAACCAAGAAAAATTCGATATCGTTGATCATTTCACTTATTGCTTCCTAGGTGATGGCTGTTTGATGGAA GGTATTTCTCATGAAGCCTGCTCACTTGCTGGAACATTAGGTCTTGGCAAGTTAGTGGCATTTTGGGATGACAACGGTAT TTCTATCGATGGTCACGTAGAGGGTTGGTTCACTGATAATACCCCTGCACGTTTTGAAGCTTATGGTTGGCATGTTATTG CCGATGTTGATGGCCACGACCCACAAGCGATTAAAGCGGCAGTTGAAACGGCGAAAGCCAATACCACTCAACCGACGTTG ATATGCTGTAAAACCGTTATCGGTTTCGGTTCTCCAAATAAATCAGGTAGCCATGATTCACACGGCTCACCATTAGGTGC AGATGAAATCACTGCGACCCGCGAATTCTTAAAATGGCCATATGGGGCATTTGAAATTCCGGCAGACATCTACGCAGGTT GGGATGCAAAAGCGTCAGGTTCTGATTTAGAGCAAGCATGGAATGAAAAATTTGCTGCTTACGGGAAAGCCCATCCTGAA TTAGCCGCTGAATTAACACGTCGTCTAAACGGTGATTTACCTGCTGATTTCGCTGAAAAAGCCCAAGCATTCGTTGAGCA ATCTCAAGAGAAAGCTGAAAATGTAGCGAGTCGTAAGTCGTCACAAAACTCTATCGAAGCATTCGCTGGCATCATGCCTG AAATTTTAGGTGGCTCGGCAGATTTGGCTGGTTCAAATCTAACGCTTTGGTCAAAATCTAAAGGCGTCACAGCTGACGAT GCCAGCGGTAACTATTTATACTACGGTGTGCGCGAATTCGGTATGAGCGGCATCATGAATGGTATTGGTTTGCACGGTGG TTTCCGTCCATTTGGTGCCACCTTCCTGATGTTTATGGAATATGCACGCAATGCAGTGCGTATGGCTTCTTTGATGGGGA TTCCAAATATCTTTGTTTATACCCATGACTCGATTGGTCAGGGCGAAGATGGCCCAACTCACCAGCCTATCGAGCAATTA GCAAACTTGCGTTTAACGCCTAATTTAGCCACATGGCGCCCTTGTGACGGTGCTGAAACAGCCGTTGCATGGAAATCTGC GCTAGAGCGTAAAGATGGCCCTAGTGCATTGGTGTTTAGCCGTCAAGGTTTGCCTGGTCAAACGCGTAACGCTGAACAAC TCGCTAACGTAGCTAAAGGGGGTTACATCCTCAAAGATAGCGATGGCGAGCCTCAAGTCATTTTGATTGGTACCGGTTCT GAAGTCGGTGTTGCCATGGATGCAGCTGAGCAATTAGCTGCCAAAGGCGTTGCTGTGCGCGTTGTGTCTATGCCAAGTAC CTCGGTGTTTGACCAACAAGATGCGGCTTATCGCGAATCTGTATTACCGCGCGCAGTGACTGCACGTGTAGCCGTTGAAG CTGCTCACGTCGATTACTGGAGCAAGTATGTTGGTCTTGATGGTGCAGTCGTCGGAATGTCTACTTTTGGTGAGTCTGCA CCGGGTGGCGTACTACTCAAGCACTTCGGTATCACAGCTGATGCCGTGGCTGAGAAAGCACAAGGTTTATTGAATTCTTA G Protein sequence : MPSRQQLANAIRALSMDAVQQANSGHPGAPMGMADIAEVLWNDFLKHNPANPNWANRDRFIMSNGHGSMLVYSLLHLTGY ELPIEELKNFRQLHSKTPGHPEYGYAPGVETTTGPLGQGISNAVGMAIAEKMLAAQFNQEKFDIVDHFTYCFLGDGCLME GISHEACSLAGTLGLGKLVAFWDDNGISIDGHVEGWFTDNTPARFEAYGWHVIADVDGHDPQAIKAAVETAKANTTQPTL ICCKTVIGFGSPNKSGSHDSHGSPLGADEITATREFLKWPYGAFEIPADIYAGWDAKASGSDLEQAWNEKFAAYGKAHPE LAAELTRRLNGDLPADFAEKAQAFVEQSQEKAENVASRKSSQNSIEAFAGIMPEILGGSADLAGSNLTLWSKSKGVTADD ASGNYLYYGVREFGMSGIMNGIGLHGGFRPFGATFLMFMEYARNAVRMASLMGIPNIFVYTHDSIGQGEDGPTHQPIEQL ANLRLTPNLATWRPCDGAETAVAWKSALERKDGPSALVFSRQGLPGQTRNAEQLANVAKGGYILKDSDGEPQVILIGTGS EVGVAMDAAEQLAAKGVAVRVVSMPSTSVFDQQDAAYRESVLPRAVTARVAVEAAHVDYWSKYVGLDGAVVGMSTFGESA PGGVLLKHFGITADAVAEKAQGLLNS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 70 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 66 |
