Gene Information

Name : Patl_3230 (Patl_3230)
Accession : YP_662790.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3878506 - 3878925 bp
Length : 420 bp
Strand : -
Note : TIGRFAM: general secretion pathway protein G; PFAM: methylation type II secretion system protein G; KEGG: pae:PA2675 probable type II secretion system protein

DNA sequence :
ATGAAAAAATGTAGTCAGCAAGGCTTTACCATGATCGAATTGCTTGTGGTGCTGGTTATCTTAGGCTTGCTTGCGGGACT
AGTCGGGCCACAGTTTTTTGGCAAAGTGGACAGCGCCAAAGTACGTACAGCCGAAACCCAAGTGAAAATGTTAAAGATGG
CAATACAAACCTATCGTCTAGATGTAGGCACATATCCCTCATCTTTAGGTGATTTGCACAGCGCGCCTAATGACGTTAAA
AATTATTGGGATGGCCCTTATTTAGACGAAACCTTACCCTTAGACCCTTGGAATAAAAACTACGAATACCGGGTTGACAG
CAAAGCAGCCCAGGGTTTTTACCTATACAGTTTAGGAGCTGACGGAGTTGAAGGTGGTGAAGAACTCAATGCCGATATAG
GTTACGTACCCAGCGTTTAA

Protein sequence :
MKKCSQQGFTMIELLVVLVILGLLAGLVGPQFFGKVDSAKVRTAETQVKMLKMAIQTYRLDVGTYPSSLGDLHSAPNDVK
NYWDGPYLDETLPLDPWNKNYEYRVDSKAAQGFYLYSLGADGVEGGEELNADIGYVPSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 8e-12 42
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 6e-12 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Patl_3230 YP_662790.1 general secretion pathway protein G VFG0180 Protein 2e-13 43
Patl_3230 YP_662790.1 general secretion pathway protein G VFG2050 Protein 3e-12 41