Gene Information

Name : Patl_3199 (Patl_3199)
Accession : YP_662759.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Virulence
Product : UTP-glucose-1-phosphate uridylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1210
EC number : -
Position : 3841002 - 3841895 bp
Length : 894 bp
Strand : -
Note : KEGG: ppr:PBPRA2674 putative UTP-glucose-1-phosphateuridylyltransferase, galU; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase

DNA sequence : 
ATGAGTCAAGTAAAGAAAGCCGTTATTCCAGTAGCAGGTCTTGGAACGCGTATGTTGCCAGCAACCAAGGCGATCCCAAA
GGAAATGCTACCAGTTGTTGATAAGCCACTTATCCAATACGTTGTATCCGAATGTGTGAATGCAGGCATAAAAGAGATTA
TCTTAGTGACTCATGCGAGTAAAAACAGCATCGAGAACCATTTTGATACCAGTTTTGAGCTTGAAGCCACGCTAGAAAAG
CGTGTTAAACGTCAACTATTGGAAGCGGTTCAAGCAATCTGCCCCAAAGACGTTACCATCATGCACGTACGCCAAGGTGT
CGCTAAAGGCTTGGGTCACGCAGTATTGTGTGCTCGCCCTATGGTTGGTGATGCGCCTTTCGCAGTGGTTCTACCTGACG
TTATTGTTGATGAAGGTACATGTAATCCTAAGAAGGATAACTTGGCAGACATGACGGCTAAATTTAATACCAGTCAAGTC
AGCCAAATCATGGTGGAAAGTGTTCCTCAAGAAGATGTTAGCAAGTACGGTATCGTTGATTTAGACGGTGCAGAACTGTC
ACCTGGTGAATCAGCGAAGATGCACGGTATGGTAGAAAAACCTAACCTATCAGATGCGCCATCAGATTTAGCTGTTGTTG
GACGTTATGTATTGTCTGAAAAAATCTGGGATCTTCTCGCTAAAACCACGCCTGGTGCAGGTGATGAAATTCAGCTAACA
GATGCTATCGATTCTTTGATGCAAACCGAGCAAGTTGATGCTTATTACATGAAAGGCAAAAGCCATGATTGTGGCAGCAA
GTTAGGCTACATGAAGGCGAACGTTGAATATGCGATGCGCCACCCCGAATTAGGTGCTGAGTTTAATGAGTTTTTACAGA
CGCTTGTGAAATAA

Protein sequence : 
MSQVKKAVIPVAGLGTRMLPATKAIPKEMLPVVDKPLIQYVVSECVNAGIKEIILVTHASKNSIENHFDTSFELEATLEK
RVKRQLLEAVQAICPKDVTIMHVRQGVAKGLGHAVLCARPMVGDAPFAVVLPDVIVDEGTCNPKKDNLADMTAKFNTSQV
SQIMVESVPQEDVSKYGIVDLDGAELSPGESAKMHGMVEKPNLSDAPSDLAVVGRYVLSEKIWDLLAKTTPGAGDEIQLT
DAIDSLMQTEQVDAYYMKGKSHDCGSKLGYMKANVEYAMRHPELGAEFNEFLQTLVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0059 YP_300149.1 UTP-glucose-1-phosphate uridylyltransferase Not tested SCC15305cap Protein 2e-54 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Patl_3199 YP_662759.1 UTP-glucose-1-phosphate uridylyltransferase VFG0964 Protein 7e-63 45