Gene Information

Name : Patl_3144 (Patl_3144)
Accession : YP_662704.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Unknown
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1131
EC number : -
Position : 3788613 - 3789533 bp
Length : 921 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: ATPase; KEGG: pae:PA3672 putative ABC-2 type transport system ATP-binding protein

DNA sequence :
ATGATATCTGTTAAGAATTTGTCGAAATCGTTCGGTCATTTTTCTGCGGTCGAGGATCTCAACTTTGACGTCAAACCTGG
AGACATAGTCGGTTTTTTGGGGCCAAACGGCGCCGGTAAGTCTACCACTATGAAAATGCTCACGGGTTTCTTGCAGCCGA
CTCACGGTAGTATTGATATTTTTGATATGTCTATCTCGCAGCATACGAAGGACATTCAGGAACGAATTGGTTATTTACCG
GAAGGTGCACCAGCCTACAGCGATATGACGACTTATCAGTTTCTAAAATTTATTGCCGAGGTCCGAGGATTTAGGGGTAA
AGAAAAGGAACAACGCATTCGAAACGTCATCGAAAAAATTGAGTTACAAGACGTCGTCAATCGACCTATTGAGAACTTAT
CAAAGGGCTTTAAACGACGCGTTGGTCTTGCTCAGGCATTGATTCATGACCCGGATATATTAATCCTAGACGAGCCTACT
GACGGTCTCGACCCGAATCAGAAACATCAAGTACGCGAGTTAATCACACAACTTGCCCAAGACAAAATAGTCATCATTTC
CACTCACATTTTAGAAGAAGTCACGGCTGTGTGTAACCGCGTGATGATCATCGCTAAAGGAAAGCTGTTGTTTGATGATA
CGCCTTTAAGATTGCAGCAGCGGTCGCGTTATTATCAAGCGGTTACGATCCATTTAAGTTATCTAGCTGACATCTCTGGT
TTAGCGGAGTTAGAAGGGGTAGCTGAAATGGAGGTCGAGCAAAAAACAGGTCACGTCACGCTTTTTCCTGAACCGGGACA
ACACATATTGCATGAGGTCACTGCTCATGTGCAGCGTGCGAAATTACCCGTGGATACTTTGTTTATTGAGCAAGGTCGTT
TAGACCAAGTCTTTAGAGATCTGACAACGGAGGTTGCTTAG

Protein sequence :
MISVKNLSKSFGHFSAVEDLNFDVKPGDIVGFLGPNGAGKSTTMKMLTGFLQPTHGSIDIFDMSISQHTKDIQERIGYLP
EGAPAYSDMTTYQFLKFIAEVRGFRGKEKEQRIRNVIEKIELQDVVNRPIENLSKGFKRRVGLAQALIHDPDILILDEPT
DGLDPNQKHQVRELITQLAQDKIVIISTHILEEVTAVCNRVMIIAKGKLLFDDTPLRLQQRSRYYQAVTIHLSYLADISG
LAELEGVAEMEVEQKTGHVTLFPEPGQHILHEVTAHVQRAKLPVDTLFIEQGRLDQVFRDLTTEVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Spaf_1123 YP_006309925.1 putative transport ATP-binding protein Not tested FWisland_1 Protein 1e-28 42