Gene Information

Name : Patl_0299 (Patl_0299)
Accession : YP_659885.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Unknown
Product : cobalamin synthesis protein, P47K
Function : -
COG functional category : R : General function prediction only
COG ID : COG0523
EC number : -
Position : 349169 - 350416 bp
Length : 1248 bp
Strand : +
Note : PFAM: cobalamin synthesis protein, P47K cobalamin synthesis CobW-like; KEGG: cps:CPS_1815 cobalamin synthesis protein/P47K family protein

DNA sequence :
ATGCAAGATTCAATGCAAGAGCCAGTGCAAAACAGCTCAGGAAACGCTCATCGAAAACTGCCGGTTACAGTACTTTCAGG
CTTTTTAGGGGCAGGTAAAACCACGGTGCTCAGCCATGTACTGAATAATCGACAAGGCAAAAAAGTGGCGGTTATTGTCA
ACGATATGAGTGAAATTAATATTGATGGCTCATTGTTAAAAAATGAGATCACACTTAATCGAAACGATGAAAAACTGGTA
GAAATGAGCAACGGCTGTATTTGTTGCACCCTCAGAGAAGACTTGCTGATTGAGGTGGGCAAACTTGCCAACTCAGGGAA
ATTTGATTATCTAGTGATTGAATCCACCGGTATTTCAGAGCCACTACCGGTAGCCGAAACTTTTACCTTTGCCGATGAAG
ATGGTGTATCGCTGTCAGATGTTGCCACGCTGGACACCATGGTAACCGTGGTCGATGGCGTTAATTTTCTCAAAGATTAT
GACGAGGCAGAGTATTTATCACAAACCGACGAAAGCTTAGGGGAAGAGGACGAACGCAGTGTCGCCGACCTACTCATTGA
GCAAGTGGAGTTTGCTGATGTGTTACTGGTGTCAAAAACTGACTTAATTGATAGCACAGAAGTTGAGCGCCTAAACGCCA
TCTTGAAAAACCTAAATACCCGAGCGCGAATCATCCCCATTGCAAACGGCCAGGTGAACATCGCCGATATCATCGGAACT
GAACTATTCGATTTTGAGCAGGCGCAACAAGCACCAGGTTGGTTACAAGAAATGCGCGGTGAGCATAACCCAGAAACAGA
AGAGTATGGTATCCAAAGCTTCAGTTACACGGCTAGGCGGCCATTTTATCCCCAGAAGTTCTATGACTTTTTGCATAACA
CCAAAGGTTACGGCAAGTTGTTGCGCTCTAAAGGCTATTTTTGGTTAGCCTCCCGCCCTGAATTTGCAGGACAATGGAAT
CAAGCTGGTGGCATTGCCCGCTATGGTTTTGGAGGCTTATTTTGGAAAGCCGTACCTAAGGCGCAATGGCCCACCGACGA
GGAATACCTTGAGTCGATCGACGCGTTATGGGAAGAGCCCTTTGGTGACATGCGTCAAGAGCTCGTGTTCATTGGTCAGA
ACCTGGACGAAGCGGCGATCACTAACGCGTTAGACGAATGCTTGTTAACAGATGACGCCCTGCTGCAAGGAAAGGCGCAT
TGGAAAACGCTGGCTGATCCTTTTCCAGCGTGGGAGAACGAAGCATGA

Protein sequence :
MQDSMQEPVQNSSGNAHRKLPVTVLSGFLGAGKTTVLSHVLNNRQGKKVAVIVNDMSEINIDGSLLKNEITLNRNDEKLV
EMSNGCICCTLREDLLIEVGKLANSGKFDYLVIESTGISEPLPVAETFTFADEDGVSLSDVATLDTMVTVVDGVNFLKDY
DEAEYLSQTDESLGEEDERSVADLLIEQVEFADVLLVSKTDLIDSTEVERLNAILKNLNTRARIIPIANGQVNIADIIGT
ELFDFEQAQQAPGWLQEMRGEHNPETEEYGIQSFSYTARRPFYPQKFYDFLHNTKGYGKLLRSKGYFWLASRPEFAGQWN
QAGGIARYGFGGLFWKAVPKAQWPTDEEYLESIDALWEEPFGDMRQELVFIGQNLDEAAITNALDECLLTDDALLQGKAH
WKTLADPFPAWENEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0408 YP_042534.1 cobalamin synthesis protein Not tested vSa¥á Protein 8e-85 46
SAR0450 YP_039898.1 cobalamin synthesis protein Not tested vSa¥á Protein 7e-86 46