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Name : Patl_2740 (Patl_2740) Accession : YP_662305.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : transposase, IS4 Function : - COG functional category : - COG ID : - EC number : - Position : 3332780 - 3333988 bp Length : 1209 bp Strand : + Note : PFAM: transposase, IS4; KEGG: ppr:PBPRB1072 hypothetical transposase DNA sequence : ATGCGTGATATTCATATCTTACACGATTTGCTTAAAAAACAATGCCCTAATCTACATGCCAAACGTCTTTCCGCTTTGAT GGTTGCCACCCAATCTTTGCTAGATGGCCAGCAACTATCGTTGACCGAATTAGGACGCAATATCTCAGGCTCCGTGGCCC CGAAACACAACATTAAACGCATCGACAGGCTGCTTGGTAATAACAACCTACATAATGAACGGCTCGACATCTATCGTTGG CACGCTCGCTTGCTTTGCGGTGCTAACCCCATGCCGGTTGTCCTTGTGGATTGGTCTGATGTGCGTGAGCAGCTCAGGCA TTTAACCTTACGTGCATCGGTCAGTGTTCAGGGGCGCTCTGTCACGCTTTATGAGCGCGTATTTTCATTCGGTGAATACA ATTCACCTGTTAGTCATAATCCGTTTTTACGGGAGTTGGCGAGTATCCTGCCGTCGGGTTGTTGCCCGTTGATTGTGACC GATGCAGGCTATCGTAACCCTTGGTTTCGTGAAGTCGAAAAGCATGGATGGTTCTGGCTAGGCCGAGTGCGCGGTGATGT GGGATTTAAGCGTGATGGGCAAGCATCATGGCAAAGTAATAAGTCGTTTTATCCCAGTGCAAATTCTCGGGCCAAATACC TTGGGTGTGGGCAATTAGGGCGTAAAAGCCCGCTTCATGCACACCTGCATTTGTACAAAGCAAAGGCCAAACATCGAAAG GACAACCGCTCTTCAAAGGCAGGTCGAAACCACACCGCCCAGCAAAGCTATCGTGCCGGTAGCAAAGAGCCTTGGCTACT CGCCACTAACCTTCCCGAGAACGATAAACTTAACTCAAAACAGCTGGTTTCTCTTTACGCAAGACGGATGCAAATAGAAG AAACCTTCCGCGATATTAAAAGCCCTCAATACGGAATGGGACTGCGCCACAGCAACAGTCGCTGTACCAAACGATTCGAC ATATTACTGCTGATAGCGATGCTCGCAGAATGGCTATTACGGTTACTCGGTATCATTGCTCAAAAACAAAATTGGGAAAG AGCATTTCAAGCTAACACCATCCGTCATCGGCGCGTGTTATCTATCATTAGGCTAGGCAGAGAAGTCAGGAAAAGGGCAA AAGATTACAGGATGAACTCAGCCCAAATGACATGGGCTATCGCCCAATATATTACCTGGGTTCACAAAGAAGGAAGACCA ATTCTATGA Protein sequence : MRDIHILHDLLKKQCPNLHAKRLSALMVATQSLLDGQQLSLTELGRNISGSVAPKHNIKRIDRLLGNNNLHNERLDIYRW HARLLCGANPMPVVLVDWSDVREQLRHLTLRASVSVQGRSVTLYERVFSFGEYNSPVSHNPFLRELASILPSGCCPLIVT DAGYRNPWFREVEKHGWFWLGRVRGDVGFKRDGQASWQSNKSFYPSANSRAKYLGCGQLGRKSPLHAHLHLYKAKAKHRK DNRSSKAGRNHTAQQSYRAGSKEPWLLATNLPENDKLNSKQLVSLYARRMQIEETFRDIKSPQYGMGLRHSNSRCTKRFD ILLLIAMLAEWLLRLLGIIAQKQNWERAFQANTIRHRRVLSIIRLGREVRKRAKDYRMNSAQMTWAIAQYITWVHKEGRP IL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| IS1999 | CAJ77042.1 | Insertion sequence | Not tested | AbaR1 | Protein | 2e-100 | 53 |
| IS10 | CAI43894.1 | transposase for IS10 | Not tested | LEE | Protein | 1e-96 | 52 |
| SF2983 | NP_708757.1 | iso-IS10R ORF | Not tested | SHI-1 | Protein | 3e-96 | 52 |
| tnp | AEA34674.1 | IS10 transposase | Not tested | Not named | Protein | 9e-96 | 52 |
| tnp | AEA34664.1 | IS10 transposase | Not tested | Not named | Protein | 5e-96 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Patl_2740 | YP_662305.1 | transposase, IS4 | VFG0647 | Protein | 1e-96 | 52 |
