Gene Information

Name : Patl_0234 (Patl_0234)
Accession : YP_659820.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 278186 - 278626 bp
Length : 441 bp
Strand : +
Note : TIGRFAM: general secretion pathway protein G; PFAM: methylation type II secretion system protein G; KEGG: eca:ECA3106 general secretion pathway protein G

DNA sequence : 
ATGAAAACGTTACAACGTACACAGCGCGGCTTTAGCTTGATTGAAGTCATGGTCGTTCTACTAATTATCGGCATTATGGC
ATCGATGATCGCCCCGTCTATTTTAGGTAATCAAGAACAAGCGCAACTGAAAAAAGCGGCAGTGGATATTCAGCAGCTTG
AAAGCGCACTAGAAATGTACAAGCTGCGTAATAACGTGTTTCCTACCAGTGAACAAGGCCTTGATGCCCTAGTTACCATT
CCTACCATCGATCCCATTCCTCGTAATTATCAAGACGGTGGATTCATCAAGCGTTTACCTGAGGACCCTTGGGGCAATCC
CTATCAGCTAATTAGCCCAGGGGAAGTCGGGGTGATTGATATTTTCTCAAATGGACCTGATGGCGAAGCCGGCACTGATG
ATGATATTGGTAACTGGAACCTTAATGACTATTTAGGCTAG

Protein sequence : 
MKTLQRTQRGFSLIEVMVVLLIIGIMASMIAPSILGNQEQAQLKKAAVDIQQLESALEMYKLRNNVFPTSEQGLDALVTI
PTIDPIPRNYQDGGFIKRLPEDPWGNPYQLISPGEVGVIDIFSNGPDGEAGTDDDIGNWNLNDYLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 3e-36 52
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 2e-36 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Patl_0234 YP_659820.1 general secretion pathway protein G VFG2050 Protein 8e-37 52
Patl_0234 YP_659820.1 general secretion pathway protein G VFG0180 Protein 4e-32 48
Patl_0234 YP_659820.1 general secretion pathway protein G VFG1871 Protein 5e-28 45