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Name : Patl_0232 (Patl_0232) Accession : YP_659818.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 275387 - 276964 bp Length : 1578 bp Strand : + Note : KEGG: ilo:IL2025 type II secretory pathway, ATPase PulE-like; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: ATPase DNA sequence : ATGAGCTCTGATTCAACGATCACAGAATCAATAAGTACTGTGGAAGCCGAAGAGCAGGCCCTCGTTGCTGCGGGCACAGA TGTAGATGCCCCCATAGAAGATGCTGAACACAAGCAGCTTGCGTTCAGTTTCGCTAAGCGCCATAAAGTGCTGCTAGAAA CCGCGGAAACGCCTGCACTGCTTTATCATACCAATGAGACAGACTTTGCTATTTTTGCTGAAGTCAGGCGCTTTTTGGGG CAGCCTTTTCAATTGCGAGAAATTGAAAGCGGCCAGTTTGAAACGTTACTGACCAGCGCATTTCAGCGCGACTCGTCAGC GGCTAAACAGCTAATGGAAGATATTGGCAATGAAAGTGATTTATTTGCGCTTGCCGAAGAGTTACCTGACACAGAAGACT TGTTAGAAAGTGAAGATGATGCACCGATCATCAAATTGATTAACGCCATGTTGGGCGAAGCCATCAAAGAAGGCGCATCT GATATTCATATTGAAACCTTTGAAACCCAGTTGTTGGTGCGCTTTAGGGTTGACGGTGTATTACGAGAAATTTTAAAACC GAATCGTAAGATGGCTTCAATGTTGGTGTCTCGTATTAAGGTTATGTCGAAAATGGACATTGCCGAGAAGCGTGTTCCCC AAGATGGACGCATTACCTTACGCATTGCCGGTCGAGCGGTTGATGTGCGGGTATCGACCATGCCATCAAGCCACGGTGAG CGCGTGGTGCTGCGTTTGCTTGATAAGAATAATGTACGCTTAAATCTTGAAGATCTAGGGATGACCAAAGTTAACCGCGG GCATTTCTCCGGTCTTATTCGTAAGCCCCATGGCATTATTTTGGTGACTGGCCCTACAGGTTCTGGTAAATCCACAACCT TGTATGCGGGATTAAGCGAAATCAACTCAAAAGATCGTAATATTCTTACCGTTGAAGACCCAATAGAATTTGATTTACAA GGCATAGGGCAAACCCAAGTCAATGCTAAAGTCGACATGACATTCGCACGAGGCTTGAGGGCGATTTTACGTCAGGATCC TGATGTGGTTATGGTTGGGGAAATCCGAGACTTAGAAACCGCGCAAATTGGTGTGCAAGCCAGTTTAACAGGCCATTTGG TGATGTCGACACTGCATACCAATACCGCTGCAGGGGCGATTACGCGCTTGGAAGATATGGGCATAGAGCCATTCTTGTTG TCGTCTAGTTTATTGGCTGTTTTATCACAGCGCTTAGTAAGAACCTTGTGCCCACAATGTAAAACCACCCACGAACCTAG CGCCCAAGAGTGCAGTATTTTAGGTGTGGCTATTGGCAGCGAAGCCAGTCATCAGGTGTGTCGACCTAAAGGTTGCGCGG CGTGCAACCATACTGGTTATCGCGGGCGTACCGGTATTCACGAATTATTGATTGTCGATGAAGGCATACGCGAGCTGATC CATAACGGTCACGGCGAGCAAGCTATTGAAAAATACATACGTCAAAATACGCCTAGCATTCGTGATGATGGTTGTCGAAA AGTCTTGAGCGGAGAAACTTCACTAGAAGAAGTCCTGCGTGTAACGCGAGAAGACTAG Protein sequence : MSSDSTITESISTVEAEEQALVAAGTDVDAPIEDAEHKQLAFSFAKRHKVLLETAETPALLYHTNETDFAIFAEVRRFLG QPFQLREIESGQFETLLTSAFQRDSSAAKQLMEDIGNESDLFALAEELPDTEDLLESEDDAPIIKLINAMLGEAIKEGAS DIHIETFETQLLVRFRVDGVLREILKPNRKMASMLVSRIKVMSKMDIAEKRVPQDGRITLRIAGRAVDVRVSTMPSSHGE RVVLRLLDKNNVRLNLEDLGMTKVNRGHFSGLIRKPHGIILVTGPTGSGKSTTLYAGLSEINSKDRNILTVEDPIEFDLQ GIGQTQVNAKVDMTFARGLRAILRQDPDVVMVGEIRDLETAQIGVQASLTGHLVMSTLHTNTAAGAITRLEDMGIEPFLL SSSLLAVLSQRLVRTLCPQCKTTHEPSAQECSILGVAIGSEASHQVCRPKGCAACNHTGYRGRTGIHELLIVDEGIRELI HNGHGEQAIEKYIRQNTPSIRDDGCRKVLSGETSLEEVLRVTRED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 8e-150 | 64 |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-149 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Patl_0232 | YP_659818.1 | general secretory pathway protein E | VFG2048 | Protein | 2e-150 | 64 |
| Patl_0232 | YP_659818.1 | general secretory pathway protein E | VFG0182 | Protein | 9e-145 | 64 |
| Patl_0232 | YP_659818.1 | general secretory pathway protein E | VFG1876 | Protein | 8e-134 | 57 |
| Patl_0232 | YP_659818.1 | general secretory pathway protein E | VFG2426 | Protein | 3e-70 | 47 |
| Patl_0232 | YP_659818.1 | general secretory pathway protein E | VFG1880 | Protein | 2e-80 | 44 |
