Gene Information

Name : Patl_2122 (Patl_2122)
Accession : YP_661694.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Unknown
Product : 3-oxoacyl-(acyl-carrier-protein) reductase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG1028
EC number : -
Position : 2570306 - 2571043 bp
Length : 738 bp
Strand : -
Note : TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: NAD-dependent epimerase/dehydratase short-chain dehydrogenase/reductase SDR Male sterility-like; KEGG: vpa:VP2054 3-oxoacyl-(acyl-carrier-protein) reductase

DNA sequence : 
ATGTCTGGATTAGACGGAAAAATAGCACTTGTAACGGGCGCTAGTCGCGGTATCGGTAAAGCGATCGCTGAACAATTAGT
CAACGATGGAGCGACGGTCATTGGTACAGCTACATCTGAAGCTGGCGCCAACGCTATCAGTGAGTATTTGGCGGACAATG
GCAAAGGCATGGTACTCAACGTATCAGAGCCAGAATCGATGACTCGCTTGTTAGCTGACATCGCAGAACAATTTGGTGTG
ATCGATATTTTGGTCAATAATGCCGGTATCACCCGGGATAACCTGCTCATGCGAATGAAAGATGAAGAATGGCAAGATAT
CATTAATACCAACCTCACATCCGTGTTTAACATGTCTAAAGCAGTTTTACGTGGCATGATGAAAAAACGTTGTGGTAGAA
TCATCAATATTGGTTCTGTTGTTGGCAGTTCAGGTAATGCAGGTCAAGCAAACTATGCTGCAGCGAAAGCTGGCGTTATA
GGTTTTACTAAATCAATGGCACGTGAAGTCGCTTCTCGTGGAATTACAGTCAATGTAGTTGCTCCAGGTTTCATTGATAC
TGATATGACCAAGGCACTGAACGACGACCAACGTGAGGCCATTTTTAAAGATATTCCAGCAAATCGTTTAGGCTCTGTTC
AAGAAGTTGCCTCAGCGGTTGGCTTTTTAGCTAGTAATAGCGCCGCATACATAACAGGGGAAACCTTGCATGTAAACGGT
GGAATGTATATGGGGTAG

Protein sequence : 
MSGLDGKIALVTGASRGIGKAIAEQLVNDGATVIGTATSEAGANAISEYLADNGKGMVLNVSEPESMTRLLADIAEQFGV
IDILVNNAGITRDNLLMRMKDEEWQDIINTNLTSVFNMSKAVLRGMMKKRCGRIINIGSVVGSSGNAGQANYAAAKAGVI
GFTKSMAREVASRGITVNVVAPGFIDTDMTKALNDDQREAIFKDIPANRLGSVQEVASAVGFLASNSAAYITGETLHVNG
GMYMG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96098.1 putative short-chain type regulator dehydrogenase Not tested T-PAI Protein 2e-28 41
unnamed AAT96175.1 putative short-chain type regulator Not tested T-PAI Protein 1e-28 41
unnamed AAT96227.1 putative short-chain type regulator Not tested T-PAI Protein 9e-29 41
unnamed AAT96054.1 putative short-chain type regulator Not tested T-PAI Protein 8e-29 41
unnamed AAT96115.1 putative short-chain type regulator Not tested T-PAI Protein 1e-29 41