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Name : Patl_1943 (Patl_1943) Accession : YP_661515.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : transposase, IS4 Function : - COG functional category : - COG ID : - EC number : - Position : 2360378 - 2361640 bp Length : 1263 bp Strand : - Note : PFAM: transposase, IS4; KEGG: ppr:PBPRB1072 hypothetical transposase DNA sequence : ATGTCTTTTATCAAGAAAGAGGATTTCGCCAAAAACCAACTAGATAACAACACCATGCGTGATATTCATATCTTACACGA TTTGCTTAAAAAACAATGCCCTAATCTACATGCCAAACGTCTTTCCTCTTTGATGGTTGCCACCCAATCTTTGCTAGATG GCCAGCACCTATCGTTGACCGAATTAGGACGCAATATCTCAGGCTCCGTGGCCCCGAAACACAACATTAAACGCATCGAC AGGCTGCTTGGTAATAACAACCTACATAATGAACGGCTCGACATCTATCGTTGGCACGCTCGCTTGCTTTGCGGTGCTAA CCCCATGCCCGTTGTCCTTGTGGATTGGTCTGATGTGCGTGAGCAGCTCAGGCATTTAACCTTACGTGCATCGGTCAGTG TTCAGGGGCGCTCTGTCACGCTTTATGAGCGCGTATTTTCGTTCGGTGAATACAATTCACCTGTTAGTCATAATCCGTTT TTACGGGAGTTGGCGAGTATCCTGCCGTCGGGTTGTTGCCCGTTGATTGTGACCGATGCAGGCTATCGTAACCCTTGGTT TCGTGAAGTCGAAAAGCATGGATGGTTCTGGCTAGGCCGAGTGCGCGGTGATGTGGGATTTAAGCGTGATGGGCAAGCAT CATGGCAAAGTAATAAGTCGTTTTATCCCAGTGCAAATTCTCGCGCCAAATACCTTGGGTGTGGGCAATTAGGGCGTAAA AGCCCGCTTCATGCACACCTGCATTTGTACAAAGCAAAGGCCAAACATCGAAAGGACAACCGTTCTTCAAAGGCAGGTCG AAACCACACCGCCCAGCAAAGCTATCGTGCGGGTAGTAAAGAGCCTTGGCTACTCGCCACTAACCTTCCCGAGAACGATA AGCTTAACTCAAAACAGCTGGTTTCCCTTTACGCAAGACGGATGCAAATAGAAGAAACCTTCCGTGATATTAAAAGCCCT CAATACGGAATGGGACTGCGCCACAGCAACAGTCGCAGTACCAAACGATTCGACATATTACTGCTGATAGCGATGCTCGC AGAATGGCTATTGCGGTTACTCGGTATCATTGCTCAAAAACAAAATTGGGAAAGAGCATTTCAAGCTAACACCATCCGTC ATCGGCGCGTGTTATCTATCATTAGGCTAGGCAGAGAAGTCAGGAAAAGGGCAAAAGATTACAGGATGAACTCAGCCCAA ATGACATGGGCTATCGCCCAATATATTACCTGGGTTCACAAAGAAGGAAGACCAATTCTATGA Protein sequence : MSFIKKEDFAKNQLDNNTMRDIHILHDLLKKQCPNLHAKRLSSLMVATQSLLDGQHLSLTELGRNISGSVAPKHNIKRID RLLGNNNLHNERLDIYRWHARLLCGANPMPVVLVDWSDVREQLRHLTLRASVSVQGRSVTLYERVFSFGEYNSPVSHNPF LRELASILPSGCCPLIVTDAGYRNPWFREVEKHGWFWLGRVRGDVGFKRDGQASWQSNKSFYPSANSRAKYLGCGQLGRK SPLHAHLHLYKAKAKHRKDNRSSKAGRNHTAQQSYRAGSKEPWLLATNLPENDKLNSKQLVSLYARRMQIEETFRDIKSP QYGMGLRHSNSRSTKRFDILLLIAMLAEWLLRLLGIIAQKQNWERAFQANTIRHRRVLSIIRLGREVRKRAKDYRMNSAQ MTWAIAQYITWVHKEGRPIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| IS1999 | CAJ77042.1 | Insertion sequence | Not tested | AbaR1 | Protein | 1e-101 | 53 |
| tnp | AEA34664.1 | IS10 transposase | Not tested | Not named | Protein | 6e-97 | 52 |
| IS10 | CAI43894.1 | transposase for IS10 | Not tested | LEE | Protein | 2e-97 | 52 |
| SF2983 | NP_708757.1 | iso-IS10R ORF | Not tested | SHI-1 | Protein | 5e-97 | 52 |
| tnp | AEA34674.1 | IS10 transposase | Not tested | Not named | Protein | 1e-96 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Patl_1943 | YP_661515.1 | transposase, IS4 | VFG0647 | Protein | 2e-97 | 52 |
