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Name : Patl_1931 (Patl_1931) Accession : YP_661503.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2337720 - 2339606 bp Length : 1887 bp Strand : + Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAACACTGTCCTTTCTTCCAGTGAAGCGGTTGCTAACGCACCGGCTAGTGCCTCCTCTGAAAGTCAAAAAATTACACG CACACCCCTTCCAGCCAGTAAAAAAGTGTATGTTGCATCGCCTAACGATCCTAGCGTTCGTGTGCCCATGCGCGAAATCA GTTTAACCGACGGGACCGCCGTCACTTTGTACGATACCTCAGGTCCCTATACCGATGAAACCGTAGACATAGACGTCAAC AAAGGCATTGCTGATGTGCGAAGTGAGTGGGTATTGTCTCGAAACGACACTGAACAATATCAAGGTCGTGAGGTACAACC CCAAGACAACGGACACTTCGATCAAGAACGCGCTTTTCAATATTACAATGATGCTTTGCAGCGCACGCCAAGACGTGCCT TACCTGGTAAAAATGTCAGCCAAATGCATTATGCCCGCAAAGGTATTATCACCAAAGAAATGGAGTATATTGCCGTTCGC GAAAACCAAGCTCGGGAAGCCCTAAGCAATGAGTTCACTACGGATGAGCGTAATAAGCGACTAAAAGGTAATTCTTTGGG AGCCAATTTGCAGCCCATTACACCAGAGTTTGTGCGCAAAGAAGTGGCTGAAGGCAGAGCGATTATCCCAGCCAATATTA ACCATACAGAACTCGAACCCATGATAATCGGGCGCAACTTTCTGGTTAAAATCAATGGCAACATTGGTAACTCAGCACTG CGTTCTTCCATTGAAGAAGAAGTCGAAAAGCTGGTGTGGTCAATTCGTTGGGGCGGCGACACCATTATGGACTTGTCAAC GGGCAAGAATATTCACTCTACTCGCGACTATATCGTTAGAAACTCTCCCGTTCCCGTGGGCACCGTGCCTATTTATCAAG CGTTAGAAAAGGTCAAGGGTGTTGCTGAAGACCTGACCTGGGAAGTGTTTCGAGATACCTTGATTGAGCAAGCCGAGCAG GGCGTAGATTATTTCACAATTCATGCTGGGGTGCGGTTGCATCATATTCCTATGACGGTGGACCGCGTTACAGGCATCGT CTCCCGTGGTGGTTCTATCATGGCAAAATGGTGCATTGCTCACCATCAAGAAAATTTTTTATACACCCATTTTGAAGACA TTTGCCACATCATGAAAGCATATGACGTGAGCTTTTCCCTCGGTGATGGCTTGCGTCCAGGCTCATTAGCCGATGCTAAC GATGAAGCGCAATTTGCCGAGCTGATTACGCTTGGTGAGCTGACTAAAATTGCCTGGAAACACGATGTACAAACTATGAT CGAAGGCCCAGGTCATGTGCCTATGCATATGATTAAAGAAAATATGGATATGCAACTCGAACATTGTCATGAAGCACCAT TTTATACGCTTGGCCCGCTGACTACCGACATCGCCCCTGGCTACGATCATATTACGAGTGGAATAGGGGCTGCGATCATT GGTTGGTATGGTTGTGCAATGCTGTGCTACGTAACCCCCAAAGAGCATTTAGGCTTGCCGAACAAAGATGATGTTAAGCA AGGGATCATGGCGTATAAAATTGCCGCTCACGCAGCGGATATTGCTAAAGGTCACCCAGGCGCTCGCTACCGCGACGATT TACTGTCTAAGGCGCGTTTTGAATTTCGTTGGGTCGATCAGTTTAATTTAGGCCTAGACCCTGATACTGCCCGCGCATTT CATGACGAAACCTTGCCTAAAGATGCAGCGAAGGTCGCCCATTTTTGCTCTATGTGTGGGCCTAAATTCTGCTCTATGAA AATCTCTCAAGAGGTGCGCGAATATTCAGCGGATTTGAAAAATACTGACATTGAGGCCGGTATGGCGCAAAAATCCGCTG AGTTTACCGCCGCAGGTGCACAGATATACGTCGCTCAGACGGAGTAA Protein sequence : MNTVLSSSEAVANAPASASSESQKITRTPLPASKKVYVASPNDPSVRVPMREISLTDGTAVTLYDTSGPYTDETVDIDVN KGIADVRSEWVLSRNDTEQYQGREVQPQDNGHFDQERAFQYYNDALQRTPRRALPGKNVSQMHYARKGIITKEMEYIAVR ENQAREALSNEFTTDERNKRLKGNSLGANLQPITPEFVRKEVAEGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSAL RSSIEEEVEKLVWSIRWGGDTIMDLSTGKNIHSTRDYIVRNSPVPVGTVPIYQALEKVKGVAEDLTWEVFRDTLIEQAEQ GVDYFTIHAGVRLHHIPMTVDRVTGIVSRGGSIMAKWCIAHHQENFLYTHFEDICHIMKAYDVSFSLGDGLRPGSLADAN DEAQFAELITLGELTKIAWKHDVQTMIEGPGHVPMHMIKENMDMQLEHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAII GWYGCAMLCYVTPKEHLGLPNKDDVKQGIMAYKIAAHAADIAKGHPGARYRDDLLSKARFEFRWVDQFNLGLDPDTARAF HDETLPKDAAKVAHFCSMCGPKFCSMKISQEVREYSADLKNTDIEAGMAQKSAEFTAAGAQIYVAQTE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 68 |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 68 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 0.0 | 65 |
