Gene Information

Name : Patl_1783 (Patl_1783)
Accession : YP_661358.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Virulence
Product : 3-deoxy-D-manno-octulosonate cytidylyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG1212
EC number : -
Position : 2142057 - 2142821 bp
Length : 765 bp
Strand : +
Note : KEGG: ecj:JW0901 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: acylneuraminate cytidylyltransferase

DNA sequence : 
ATGAACTTCAACGTTATCATTCCTGCACGTTACGCCTCCACTCGATTTCCGGGCAAACCCCTAGTCGAAATCAATGGTAA
GCCTATGGTGCAACATGTATATGATCGCGCTATTGAATCAGGTGCGTCAAATGTGATTGTAGCCACTGACGATGCCCGCA
TCGCAAAAGCGGTGAGTGATTTTGGGGGAAAATATTGCATGACTGGGGCTCATCATGAGTCTGGTACTGAGAGATTGGCT
GAAGTGGTGGAAATGCAGGACATGCTGTCTCAGGAAATTGTGGTTAACGTTCAAGGTGATGAGCCGTTTATTCCTGCTGA
GAACATACAACAAGTGGCAGAAAACCTACATCATCATCAACAAGCCGAAATGGCCACTTTGGCGGTTAAAATAGTCGATG
TAGAAGAAGCATTTAATCCTAATGCCGTCAAAGTCGTGTTAGACAAGCAAGGTTATGCTATGTATTTCACGCGGGCAACA
ATACCTTATGATCGGGCGCGCTTTTTGGATGAAGATATCATTGATGAAATCGGTGATTACTACCTGCGCCATGTGGGGAT
TTATGCCTATCGTGCGGGTTTTATAAAACAATATGTGAACATGTCACCGTCAGGATTAGAGCAAATCGAGTCATTAGAGC
AATTGCGTGTGTTGTGGCACGGTGAGAAAATTCATGTTGATATCGCGCGTAAAACGCCGCCCGCAGGCATTGATACTCCT
GAAGACTTGAAGCGTATTCTCGCCGACCCTTCCCTTAAATTTTAG

Protein sequence : 
MNFNVIIPARYASTRFPGKPLVEINGKPMVQHVYDRAIESGASNVIVATDDARIAKAVSDFGGKYCMTGAHHESGTERLA
EVVEMQDMLSQEIVVNVQGDEPFIPAENIQQVAENLHHHQQAEMATLAVKIVDVEEAFNPNAVKVVLDKQGYAMYFTRAT
IPYDRARFLDEDIIDEIGDYYLRHVGIYAYRAGFIKQYVNMSPSGLEQIESLEQLRVLWHGEKIHVDIARKTPPAGIDTP
EDLKRILADPSLKF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsU YP_854332.1 3-deoxy-manno-octulosonate cytidylyltransferase Not tested PAI I APEC-O1 Protein 8e-43 44
kpsU CAE85213.1 KpsU protein Virulence PAI V 536 Protein 1e-42 44
kpsU AAZ04469.1 CMP-KDO synthetase Virulence PAI I APEC-O1 Protein 6e-43 44