Gene Information

Name : Patl_1740 (Patl_1740)
Accession : YP_661315.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Unknown
Product : cyclase/dehydrase
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG2867
EC number : -
Position : 2080248 - 2080679 bp
Length : 432 bp
Strand : +
Note : PFAM: cyclase/dehydrase; KEGG: vpa:VP0645 hypothetical protein

DNA sequence :
ATGCCTAATGTGACCCGCAGCGCTCTGGTAGCGTTTAGTGCTGAATCAATGTTTGATTTGATAAATGACGTGCAACGTTA
TCCAGAATTTTTACCTGGTTGTGCTCAGACAAAAGTAACCCATGCAGACGAACACAGCATGGAAGCCTCTTTGCTGATTT
CAAAAGCGGGTATCAAACAATGGTTTAGTACACGTAACGAGTTATCTCGCGGTGAGTACATTAGAATGAATTTGGTCGAC
GGGCCTTTCTCAGAACTGCGTGGCGGCTGGACCTTCAAGGCGCTTTCTGACAGCGCGTGTAAAATCGAATTAAATCTAGA
TTTTGCTTTTTCGAGTCGCTTAGTGGAAATGGCCTTTGGCCGTGTTTTTAATGCGATTGCAGCGAATATGGTGGTCGCTT
TTACACAGCGAGCAAAAGAGATTTATACATGA

Protein sequence :
MPNVTRSALVAFSAESMFDLINDVQRYPEFLPGCAQTKVTHADEHSMEASLLISKAGIKQWFSTRNELSRGEYIRMNLVD
GPFSELRGGWTFKALSDSACKIELNLDFAFSSRLVEMAFGRVFNAIAANMVVAFTQRAKEIYT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAA82716.1 - Not tested VPI Protein 3e-40 58