Gene Information

Name : Patl_1710 (Patl_1710)
Accession : YP_661285.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG1432
EC number : -
Position : 2044795 - 2045271 bp
Length : 477 bp
Strand : -
Note : PFAM: protein of unknown function DUF88; KEGG: cps:CPS_0134 hypothetical protein

DNA sequence :
ATGCCCGCTAGAATTGCAGTATTCGTTGATGTGCAAAACATTTATTACACCACCCGTGACACCTACCAAAAACAATTTAA
CTATCGACAGTTTTGGCAGCATTTAAGTGAGCAAGGCGACATCGTTATCGCTAATGCTTATGCCACCGAACGTCATGACT
CCCAACAACAAAAGTTTCAGTCAGCTTTGAAGCACATTGGCTTTAACGTTAAGTTAAAGCCTTTTATTCAGCGCAGTGAC
GGCTCAGCAAAGGGCGACTGGGATGTGGGGATCACCATTGATGTATTAGATGCTGCACAGCAAGTAGACACAGTCGTGTT
GCTCTCAGGAGATGGAGATTTTGACTTATTACTCAAGGCAGTGAAGAAGAAGCATGAGGTAAAAACGAAGGTGTACGGCG
TGCCAGCGCTTACCGCGAATGCTTTAGTTAGCGCCTGTGATGAGTTTGTTGAGATTACGCCAGCAATGTTGCAGTGA

Protein sequence :
MPARIAVFVDVQNIYYTTRDTYQKQFNYRQFWQHLSEQGDIVIANAYATERHDSQQQKFQSALKHIGFNVKLKPFIQRSD
GSAKGDWDVGITIDVLDAAQQVDTVVLLSGDGDFDLLLKAVKKKHEVKTKVYGVPALTANALVSACDEFVEITPAMLQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A1407 YP_001217351.1 hypothetical protein Not tested VPI-2 Protein 2e-30 53