Gene Information

Name : Patl_1405 (Patl_1405)
Accession : YP_660984.1
Strain : Pseudoalteromonas atlantica T6c
Genome accession: NC_008228
Putative virulence/resistance : Unknown
Product : zinc-binding alcohol dehydrogenase
Function : -
COG functional category : R : General function prediction only
COG ID : COG2130
EC number : -
Position : 1689023 - 1690048 bp
Length : 1026 bp
Strand : -
Note : PFAM: Alcohol dehydrogenase, zinc-binding Alcohol dehydrogenase GroES-like; KEGG: bja:blr3973 probable NADP-dependent oxidoreductase

DNA sequence :
ATGTCTCAATATGTAAACCGCGCGGTTGTATTAGCGAAAAGACCTGATGGCGAGCCACAAAATGATGATTTTAGAATTGA
AGAGCAACCTCTAGCCCCACTTGCACAAGGTGAGATACTGGTTCGCACTGTCTGGTTATCCTTGGACCCCTACATGCGCC
CGCGCATGAATGACATGAAATCATATGCAGCGCCTACCCCTATTGGCGGCACAATGACAGGTGAAGTGGTCGGTGAGGTA
ATGGAGTCGCGCTCAACTAAGTACGCTGTGGGCGATCATATCACCGCTTATGGCGGATGGCAGGAGTACTTCGTCAAACC
GGATGACGCGCCCATGATGTACAAAATTCAAGATCTGAATATTCCTTTGCAATCTTACCTTGGTGCGGCGGGTATGACTG
GTCGCACGGCGTATTTCGGGTTAACCGAAATCGGTAAACCGCAACCCGGCGACACCTTAGTGGTGTCTGCTGCCTCAGGC
GCTGTTGGCGGCATTGTAGGCCAGTTAGGCAAGATGTACGGCTGTAAAGTCATTGGTATCGCAGGTGGCAGCGAAAAATG
TCAGTTCGTAGTTGATGAGCTTGGCTTTGATGCCTGCGTAGATTACAAAGCAGGTGATCTTGAAAAAGACTTACAACAAG
CCTGCCCCGATGGTATCGATATCTATTTTGAGAACGTAGGCGGTGATGTCACTCGCGCGGTGGCTAAGTTACTCAACCCA
GGCGCTAGAGTGCCCATTTGTGGCTATGTCTCAAATTATAACGATACTGATCTAAGCAAGGTACAAACGCCGCAAGATAT
TTTGGCAACATCCCCTAACCCACCCACCGCTCGCTTTTTTGTGCAAACTGAATGGCAAGATCAACACCAACCAATCACCC
AAAAATTGGCGCAGTGGGTCAAAGATGGCAAATTGGTGTATCGAGAGTCTATTGCTGAGGGCATTGAGCAATCGATACCT
GCATTCCAAGGGATGCTCAAAGGCAAAAACTTCGGTAAACAGCTGGTCAGTATTAGCCCTGAATAA

Protein sequence :
MSQYVNRAVVLAKRPDGEPQNDDFRIEEQPLAPLAQGEILVRTVWLSLDPYMRPRMNDMKSYAAPTPIGGTMTGEVVGEV
MESRSTKYAVGDHITAYGGWQEYFVKPDDAPMMYKIQDLNIPLQSYLGAAGMTGRTAYFGLTEIGKPQPGDTLVVSAASG
AVGGIVGQLGKMYGCKVIGIAGGSEKCQFVVDELGFDACVDYKAGDLEKDLQQACPDGIDIYFENVGGDVTRAVAKLLNP
GARVPICGYVSNYNDTDLSKVQTPQDILATSPNPPTARFFVQTEWQDQHQPITQKLAQWVKDGKLVYRESIAEGIEQSIP
AFQGMLKGKNFGKQLVSISPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0097 YP_252012.1 hypothetical protein Not tested SCCmec Protein 8e-55 44