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Name : Patl_1311 (Patl_1311) Accession : YP_660891.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : - Position : 1578884 - 1580002 bp Length : 1119 bp Strand : + Note : KEGG: ppr:PBPRA0797 putative pyrimidine deaminase/pyrimidine reductase; TIGRFAM: riboflavin biosynthesis protein RibD Riboflavin-specific deaminase-like; PFAM: CMP/dCMP deaminase, zinc-binding bifunctional deaminase-reductase-like DNA sequence : GTGACGCAATTCTCTGCGCTTGACGCAAAAATGATGGCTTTGGCCATCCGCTTGGCTGAAAAAGGCCAATACACAACTTC GCCGAATCCCAATGTGGGCTGTGTTATTACTGATGCCCAAGGCAATATTGTCGGCCAAGGCTGGCATCAAAAAGCCGGGA CCCCCCATGCAGAAATTCATGCCATTGCCCAAGCGGGTGAGCGCACCAAAGGCGCGACCGCTTACGTCACATTAGAGCCG TGCAATCATCACGGGCGTACCGGCCCATGCTCCGAAGCATTATTAGACGCAGGGGTGAAACGCGTTGTTGCCGCTATGGT TGACCCAAACCCACTCGTAGCCGGCAGTGGTTTACAAAAGCTCAGTGACGCGGGTGTTCAGGTAAGCAGTGGTTTACTTG AAAGTGAAGCCAAAGCGCTTAATCGCGGCTTTATCAAACGCATGCAAACAGGCAAGCCTTGGGTTACTGTTAAGCTGGCA TCAAGCTTGGACGGCAAAACCGCGTTAAATAATGGTGAAAGCCAGTGGATAACCGGGCCCTTAGCCCGTGAAGATGTGCA ACGCCACCGAGCGCAGAGTTGCGCGATATTGTCTGGCTCGGGCACGGTCCTGGCGGATAACCCTTCATTGAATGTGCGTT ACAGCGAATTGGGTTTTGCAAGAAATGCGTTAGCAGAAGTGAATTTACGCCAACCTGTGCGAGTTTTGCTCGATGGGCGC AACCAGATGCGCCCTGATCTGCATTTATTTGCTTTATCGTCTCCCATTGTGATTATCAATAGCCAGCCAAATACAGCTGA ATTTCCAGATCATGTTGAGCAATATCAAGCCCAATCAAACGGTGCGCAACTTGACCTGCAAGATGTAATGAAACACCTTG GCCAGCGCGGGTTTAACCATATATGGGTAGAGGCAGGGGCGAAGCTTGCAGGGGCGTTATTACAGAATAAACTGATAGAT GAATTGATTTTGTACCAAGCGCCCAAACTATTAGGAGATAAAGGCCGAGATTTATTTGCTGTGGACGAATTAACCCAAAT GCAGCAAGCTTTTGAATTACAATGGCAGGATGTACGCCAAGTCGGCCCAGATTTAAAGCTGACGGCGCGCTTTACATAA Protein sequence : MTQFSALDAKMMALAIRLAEKGQYTTSPNPNVGCVITDAQGNIVGQGWHQKAGTPHAEIHAIAQAGERTKGATAYVTLEP CNHHGRTGPCSEALLDAGVKRVVAAMVDPNPLVAGSGLQKLSDAGVQVSSGLLESEAKALNRGFIKRMQTGKPWVTVKLA SSLDGKTALNNGESQWITGPLAREDVQRHRAQSCAILSGSGTVLADNPSLNVRYSELGFARNALAEVNLRQPVRVLLDGR NQMRPDLHLFALSSPIVIINSQPNTAEFPDHVEQYQAQSNGAQLDLQDVMKHLGQRGFNHIWVEAGAKLAGALLQNKLID ELILYQAPKLLGDKGRDLFAVDELTQMQQAFELQWQDVRQVGPDLKLTARFT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 6e-57 | 47 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 6e-57 | 47 |
