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Name : Patl_1227 (Patl_1227) Accession : YP_660807.1 Strain : Pseudoalteromonas atlantica T6c Genome accession: NC_008228 Putative virulence/resistance : Unknown Product : S-adenosylmethionine--tRNA-ribosyltransferase- isomerase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0809 EC number : - Position : 1476482 - 1477522 bp Length : 1041 bp Strand : + Note : TIGRFAM: S-adenosylmethionine--tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; KEGG: son:SO3114 S-adenosylmethionine:tRNA ribosyltransferase-isomerase DNA sequence : ATGAAAGTTTCTGAATTCCAGTTTGATTTACCTGAAGCCCTCATTGCGCGTTACCCCACTAAAGAGCGGACCGCGAGTCG ATTAATGCACTTAGCCACAACAGGCTTGTCGCATTTGCAATTCACTGACGTGGTGAACTTGATTAATCCAGGCGATTTAC TGATCTTCAATAATACTCGCGTCATACCTGCACGGTTACTCGGGCAAAAAGCCTCTGGTGGTAAAGTAGAAGTGTTGATT GAGCGCATTATTGACGAACACCATGTTTTAGCCCATGTACGCGCCAGTAAATCTCCTAAAGAGGGCACGCAACTATTACT TGAGGGCAAAGTGGAAATGGAAATGGTAGGGCGTCAAGATGCACTATTTACATTAAAGCTGCTTAACCCTGAGCCTATTC TTGAGATACTCGAACAATATGGGCATATGCCGCTACCGCCCTATATTGATCGCCCTGATGAAGAGTCTGACAAAGAGCGT TATCAAACGGTATACAACGAGAAACCAGGAGCCGTCGCCGCGCCTACCGCAGGTTTACACTTTGACGACGTCATTTTGAA GCAATTACGCGATAAAGGCGTAAACACAGAATTTGTGACCTTGCATGTTGGGGCTGGAACCTTTCAGCCAGTGCGGGTTG ATAACATTCTAGAGCACCAGATGCACTCTGAGTATGCAGAGGTGCCGCAAAACGTTGTGGATGCTATTGCTAAAACCAAA ACGGCGGGTAAACGCGTGATCGCTGTGGGCACTACGTCGGTAAGATCGTTAGAGTCAGCAGCGAAAGCAGCATTAGAAAA TGGCACTGCGCTGGCGTCGTTTTTCAGTGACACAGACATTTTTATTTATCCTGGCTATAAATTTCAGGTGATTGATGCCA TGTTGACCAACTTTCATCTATCAGAATCGACGCTCATCATGTTAGTCAGCGCCTTTGCTGGAAAAGAAAATGTGATGAAT GCGTACCAAGAAGCTATTGCCCAGCAATACCGCTTTTTCAGCTATGGCGATGCCATGTTCATTGAGAAAAACCAAGACTG A Protein sequence : MKVSEFQFDLPEALIARYPTKERTASRLMHLATTGLSHLQFTDVVNLINPGDLLIFNNTRVIPARLLGQKASGGKVEVLI ERIIDEHHVLAHVRASKSPKEGTQLLLEGKVEMEMVGRQDALFTLKLLNPEPILEILEQYGHMPLPPYIDRPDEESDKER YQTVYNEKPGAVAAPTAGLHFDDVILKQLRDKGVNTEFVTLHVGAGTFQPVRVDNILEHQMHSEYAEVPQNVVDAIAKTK TAGKRVIAVGTTSVRSLESAAKAALENGTALASFFSDTDIFIYPGYKFQVIDAMLTNFHLSESTLIMLVSAFAGKENVMN AYQEAIAQQYRFFSYGDAMFIEKNQD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| queA | AAT96122.1 | QueA | Not tested | T-PAI | Protein | 3e-103 | 63 |
| queA | AAT96070.1 | QueA | Not tested | T-PAI | Protein | 2e-99 | 63 |
| queA | AAT96182.1 | QueA | Not tested | T-PAI | Protein | 2e-99 | 63 |
| queA | AAF71483.1 | QueA | Not tested | Hrp PAI | Protein | 3e-103 | 62 |
| queA | AAF71490.1 | QueA | Not tested | Hrp PAI | Protein | 6e-99 | 62 |
| queA | AAT96106.1 | QueA | Not tested | T-PAI | Protein | 5e-99 | 62 |
| queA | AAT96042.1 | QueA | Not tested | T-PAI | Protein | 3e-99 | 62 |
