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Name : RD1_1049 (RD1_1049) Accession : YP_681398.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Virulence Product : TRAP dicarboxylate transporter subunit DctM Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG1593 EC number : - Position : 1011908 - 1013185 bp Length : 1278 bp Strand : - Note : - DNA sequence : ATGGGCCTCACTGTTCTTATTGCCGTTTTCGTCATCGGTCTTGTCGTGGGCATCCCCGTGGCCATCACTCTCGGCCTGAG CTCCCTCTGCTATCTGCTGGTCACGGGTATTCCTGTGGTCGTCATGCCACAGAAAATGTATGCGGGCATGGATGTTTTCG TTTTGCTCAGCATCCCCGGCTTTATTCTCGCAGGCAACCTGATGAACCGGGGCGGTATCACGGAACGGATCATCCGCTTT GCCAATGCGCTGGTCGGTTGGATCAGGGGGGGCCTTGGCCTCACGAACGTGGGCGCGTCGATGCTGTTCGGGGGCATCAC CGGCACGGCGGTGGCCGATGCGGCATCCATCGGCGGCGTCATGATACCGGGCATGAAAAAGGCCGGATACCCCGCCGATT TTTCTGCCGCCATCACCGCCGCCTCCTCCACCGTCGGGCCGATCATTCCGCCAAGCGTGCCGATGATCATCGTCGGGGCC TTGTCCGGTATCTCTGTCGGAAAGATGTTCCTGGCCGGAGCGATACCGGGCATTCTGCTGGGTATGGCGATGATGATCAC CACCTATGTGATTGCGCGCCGCCGGAATTTTCCCAAACAGGAATGGCAGGGCGTGGGCGAAATCGGGCGGTCCTTTGCGG GCGCGTTCTGGGCGCTCGCGATGACCGCTTTGATCCTTTACGGTCTGCTCAGCGGCGTGGCGACACCGACGGAAACGGCA ATCATCGCAAGTGTCTATGCCATGTTCATCGGGCTTGTCGTCTACCGCGAACTTCCGTTCCGTGAAATACCCAGGATCAT TGTCGACAGCGCTGTTGCCGCATCGGGGATTCTGGTTCTGGTCGGGTTTGCGAATGTGTTCGGCTGGATCCTCGTCTCCG AGCGTATTCCACAGGCGATCGCCGCCGCTGTGTTGTCGTTCACGGAAAACAAATTCATCATCATCCTGATCATCAACGTC CTGCTGCTGATTGTCGGCATGTTCATGGAAACGATTGCGGCTCTGATCATCCTCTTTGTCCCGCTTCTGACGCTTGCGAC CTCCGTGGGGATTGACCCGCTGCATTTTGCGACCTTCGCGGTGCTGAACCTGATGATCGGCCTGACCACCCCGCCCCTTG GCGTGTGCCTGTTTGTCTGCGCGGGGATCGCGCGATTGCCCTTGACCCCCGTTATCATCGCGATCCTGCCGTTTATCGCG ACAAACATCATCGTTCTGTTGATGGTGTCCTACTTCCCCCCGCTGGCGACCTGGTTGCCCTCTGTCCTTATACCGTAA Protein sequence : MGLTVLIAVFVIGLVVGIPVAITLGLSSLCYLLVTGIPVVVMPQKMYAGMDVFVLLSIPGFILAGNLMNRGGITERIIRF ANALVGWIRGGLGLTNVGASMLFGGITGTAVADAASIGGVMIPGMKKAGYPADFSAAITAASSTVGPIIPPSVPMIIVGA LSGISVGKMFLAGAIPGILLGMAMMITTYVIARRRNFPKQEWQGVGEIGRSFAGAFWALAMTALILYGLLSGVATPTETA IIASVYAMFIGLVVYRELPFREIPRIIVDSAVAASGILVLVGFANVFGWILVSERIPQAIAAAVLSFTENKFIIILIINV LLLIVGMFMETIAALIILFVPLLTLATSVGIDPLHFATFAVLNLMIGLTTPPLGVCLFVCAGIARLPLTPVIIAILPFIA TNIIVLLMVSYFPPLATWLPSVLIP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1777 | NP_231412.1 | hypothetical protein | Not tested | VPI-2 | Protein | 8e-57 | 41 |
| VC0395_A1375 | YP_001217318.1 | hypothetical protein | Not tested | VPI-2 | Protein | 8e-57 | 41 |
| VPI2_0025c | ACA01842.1 | TRAP dicarboxylate transporter DctM subunit | Not tested | VPI-2 | Protein | 6e-57 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| RD1_1049 | YP_681398.1 | TRAP dicarboxylate transporter subunit DctM | VFG1110 | Protein | 3e-57 | 41 |
