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Name : gabD (RD1_0927) Accession : YP_681281.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.16 Position : 896864 - 898342 bp Length : 1479 bp Strand : - Note : - DNA sequence : ATGAAAGACTTGCCTGCAACCAATCTGAAATCACTGCTCAAGGACCCCAGCCTGCTGGAAACGCGCGCCTATGTGGACGG CGCATGGGTTGACGGGGACAACGGCACTTTTGATGTGACCAACCCCGCACGCGGTGACGTCATCGCGCAGGTCGCGGATC TGAGCCGCACGCAGGTGGCGCAGGCCATCGCGCGCGCTGAAGTGGCGCAGAAGGACTGGGCGGCCCAAACCGGGAAAGAA CGCGCAGGTGTCATGCGCCGGTGGTTTGATCTGATGATGGAAAACGCCGACGATCTTGCGACCATCCTGACCGCAGAACA GGGCAAACCCCACGCCGAGGCCAAGGGCGAAATCGCCTATGGAGCGAGCTTTATCGAGTTTATGGGCGAACAGGCAAAAC GCGTTTACGGAGAGACCATTCCCGGGCACCAGCGCGACAAACGTATCATCGTGCTCAAGCAGCCCATCGGCGTTGCCGCC TCAATCACACCGTGGAATTTCCCCAACGCGATGATCACCCGCAAGGCGGCCCCTGCCCTTGCGGTCGGGTGTGCCTTTGT GGCCCGCCCGGCGGCTGAGACGCCGTTGTCCGCGATCGCAATGGGTGTTCTGGCCGAGCGTGCGGGCATCCCCGCAGGTG TCTTCAACGTTGTGCCTTCGTCGTCGTCTTCGGAGATCGGCAAGGAGTTCTGCGAAAACCCCGGTGTGCGCAAGCTGACG TTCACCGGCTCAACCGAAGTCGGTCGCATTCTTTTGAGACAGGCCGCCGATCAGGTCATGAAGTGCTCTATGGAGCTGGG CGGGAATGCCCCGTTTATCGTGTTTGACGACGCAGATCTTGATGCCGCCGTTGAGGGCGCGATGATGTGCAAGTTCCGCA ACAACGGTCAGACCTGTGTCTGTGCAAACCGAATCTACGTTCAGGCCGGGGTCTATGACGCCTTTGCCGAAAAGCTGAAA ACCGCCGTCGAAGGGTTGCGCGTTGGCGATGGTCTTGAGGACGGCGTGACAACCGGCCCGCTGATTAACACGGAGGCCGT TGAAAAAGTGCAGGACCACATGAACGACGTGGTCTCGAACGGGGGGGCTGTGCTGACGGGCGGCAAACCGCATGCGCTGG GTGGCTCGTTCTTTGAGCCGACGATTGTGACCGGCGTGACCCAGGACATGAAAGTCGCGCAGGAAGAAACATTCGGCCCG CTCGCTCCTCTGTTCAAATTCGAGGATGAGGATGATGTGATCGCAATGGCCAATGATACGATCTTTGGTCTTGCCTCGTA TTTTTACGCCAAGGACCTCAGCCGCGTTTACAAAGTGTCAGAGGCGCTGGAATACGGCATCGTTGGTGTGAACACAGGGA TCATCTCGACCGAACTCGGGCCCTTTGGCGGGGTCAAACAATCCGGTCTTGGCCGCGAAGGATCACACCATGGCATCGAG GATTTCCTCGAAATGAAATACATCTGCATGAGCGTGTAA Protein sequence : MKDLPATNLKSLLKDPSLLETRAYVDGAWVDGDNGTFDVTNPARGDVIAQVADLSRTQVAQAIARAEVAQKDWAAQTGKE RAGVMRRWFDLMMENADDLATILTAEQGKPHAEAKGEIAYGASFIEFMGEQAKRVYGETIPGHQRDKRIIVLKQPIGVAA SITPWNFPNAMITRKAAPALAVGCAFVARPAAETPLSAIAMGVLAERAGIPAGVFNVVPSSSSSEIGKEFCENPGVRKLT FTGSTEVGRILLRQAADQVMKCSMELGGNAPFIVFDDADLDAAVEGAMMCKFRNNGQTCVCANRIYVQAGVYDAFAEKLK TAVEGLRVGDGLEDGVTTGPLINTEAVEKVQDHMNDVVSNGGAVLTGGKPHALGGSFFEPTIVTGVTQDMKVAQEETFGP LAPLFKFEDEDDVIAMANDTIFGLASYFYAKDLSRVYKVSEALEYGIVGVNTGIISTELGPFGGVKQSGLGREGSHHGIE DFLEMKYICMSV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 4e-148 | 61 |
