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Name : hslU (RD1_0448) Accession : YP_680847.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 433940 - 435247 bp Length : 1308 bp Strand : - Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : TTGACTGATCTTACCCCCCGCGAAATCGTTTCCGAACTCGACCGCTTTATCATCGGGCAGAATGACGCCAAGCGTGCTGT TGCCGTGGCCCTGCGCAACCGCTGGCGGCGCAAGCAACTGGCGGATGACCTGCGGGACGAGGTTTATCCGAAAAACATCC TCATGATCGGACCGACCGGTGTTGGTAAAACAGAAATCAGCCGACGGTTGGCGAAACTGGCCCGCGCGCCCTTTCTGAAG GTTGAAGCCACCAAATTCACCGAAGTCGGCTATGTCGGGCGTGACGTTGAACAGATCATCCGTGACCTGGTGGATAACGC GATCAGCATGACGCGCGATCACATGCGCGATGACGTGAAGGCCAACGCGCATCAGGCGGCCGAAGAACGGGTGATTACCG CCATTGCCGGCGAAGATGCCCGCGAAAGCACCCGCGAGATGTTCCGTAAGAAACTGAAAGCCGGCGATCTGGATGATACC GTCATTGAACTTGATGTCGCTGATACCTCCAGCCCTTTTCCAATGATGGACATTCCCGGCCAACCCGGCGGAAACATGGG GATGATGAACCTTGGTGACATCTTTGGCAAAGCGCTCGGAGGACGAACGACCCGCAAGAAGATGACCGTTTCCCAAAGCT ACGACATTCTAATCGGTGAAGAGGCGGACAAACTGCTGGATGATGAAACGGTAAACCGTGCCGCCATCGAGGCGGTGGAA CAGAATGGCATCGTGTTTCTCGATGAAATCGACAAGGTTTGCGCAAAATCCGATACACGCGGCGGCGATGTGAGCCGCGA GGGCGTGCAGCGCGATCTGTTGCCGTTGATCGAAGGCACCACCGTCAGCACGAAACACGGGCCGATCAAGACCGACCACA TCCTGTTTATTGCTTCCGGCGCGTTCCACATCGCGAAACCCTCTGATCTTTTGCCGGAGCTTCAGGGCCGCCTGCCCATC CGGGTGGAGCTGCGCGCCCTGACCGAAGAGGATTTTGTGCGCATCCTGACGGAAACCGACAATGCGCTGACGCTGCAATA CACCGCCCTTATGGGCACCGAGGAAGTTACCGTGTCCTTCACCGAAGACGGCATCGCGGCGCTGGCAAAGATCGCCGCTG AGGTGAATCAATCCGTCGAAAACATCGGGGCGCGCAGACTCTATACGGTGATGGAGCGTGTGTTCGAAGAGCTGTCGTTT TCCGCGCCGGACCGTGCGGGTGAAGAGATCATCGTGGATGCCGCCTTTGTGGATGAGAACCTCGGCGCGCTGGCAAAATC GACCGATGTGAGCCGCTACGTCCTTTAG Protein sequence : MTDLTPREIVSELDRFIIGQNDAKRAVAVALRNRWRRKQLADDLRDEVYPKNILMIGPTGVGKTEISRRLAKLARAPFLK VEATKFTEVGYVGRDVEQIIRDLVDNAISMTRDHMRDDVKANAHQAAEERVITAIAGEDARESTREMFRKKLKAGDLDDT VIELDVADTSSPFPMMDIPGQPGGNMGMMNLGDIFGKALGGRTTRKKMTVSQSYDILIGEEADKLLDDETVNRAAIEAVE QNGIVFLDEIDKVCAKSDTRGGDVSREGVQRDLLPLIEGTTVSTKHGPIKTDHILFIASGAFHIAKPSDLLPELQGRLPI RVELRALTEEDFVRILTETDNALTLQYTALMGTEEVTVSFTEDGIAALAKIAAEVNQSVENIGARRLYTVMERVFEELSF SAPDRAGEEIIVDAAFVDENLGALAKSTDVSRYVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 3e-90 | 44 |
