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Name : RD1_3974 (RD1_3974) Accession : YP_684114.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Unknown Product : AMP-binding protein Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG0318 EC number : - Position : 3833041 - 3834663 bp Length : 1623 bp Strand : + Note : - DNA sequence : ATGGGATGGATGTCAAACGAAACGGGACTGGATAAATGTGCCGCAAACCATGTGCCGCTGACGCCCTTGTCCCATCTGAA ACGCGCAGCCGTGGTTTTTGCCAACCACACCGCGATTGTCTACGGCGATGTGCGACGCAGCTACGGCGAACATGCAGCGC GCGCAACGCGGCTGGCCTCGGCATTGGCGGCAAAGGGTGTCGCACCGGGTGATGTCGTTGCAACGCTGCTGCCCAATGTG CCCGCACAGGTCGAAGCGCATTTTGGCGTGCCCGCCTGTGGGGCCGTGCTCAATACCATCAACACGCGGCTGGACGTGGA TACTGTCGCCTACATCCTTGAACATGGCGAAGCCAGGATGGTACTGGTCGACTCCCAGTTTCTGGATCTCGCCGAAGCGG CCTGTGCCACGCTTGCATCCCCTCCCACGCTGATCGAGGTGCCGGACGCCGTTGCGGGTATCGAAGCGTCGGGCCGCCAT CAGACCTACGAAGACCTCATCGCTGCCGGCACGACGGATTTCGACTGGATCATGCCGCAGGATGAATGGGAAAGCCTCGC GTTGAATTATACCTCCGGCACGACCGGCAGGCCGAAAGGCGTGGTCTATCACCATCGCGGGGCCTATCTGATGACCATGG GCACGGTGATCAGCTGGCGCATGACCCTGCACCCGACGTTTATGCAGATCGTTCCGCTGTTTCATTGCAACGGCTGGAAC CACGCATGGATGATGCCGCTCATTGGCGGCACGCTGGTCTGTTGTCGCGATATCACCGCACCGGCGATCTTCAACGCCAT CGCGGATGAAAAGGTGACGCATTTCGGCGGTGCGCCGATTGTTCTGAACATGCTGGTGAACGCCCCATCAGAAGAGCGCC GCACGATTGAACACCCGGTTGAAATCTTTACCGCCGGCGCGCCCCCTGCCCCGGCAACCCTCGCCAAGGTCGAAGCACTG GGTTTCAACGTAACACAGGTCTACGGGCTGACGGAAACCTACGGTCATGTGACCGAGTGCCTGTGGCGCAGCGAATGGGA CGGGCATGAAGCGGAAGCCAAAGCGGCGATCAAATCGCGTCAGGGCGTTCCCTTTCCGATGATGGAAGACATCGTGGTGA TGGATGCCGATATGACGCCTGTACCCACCGATGCCAGCACGCAGGGCGAGATCATGATCCGTGGCAATTCGGTGATGAAG GGGTATTACAAGAACCCGCAGGCCACGTCAGAAGCCTTTGCGGGTGGCTATTTCCATTCCGGCGACATCGCGGTGCAGCA TGACGACAGCTACATCCAGATCGCGGATCGCGCCAAGGACATCATCATCTCAGGCGGTGAAAACATCTCTTCGGTGGAGG TCGAGGGCGTGTTGATGGCCCATGACGATGTGATGCTGGCCGCTGTGGTCGCCAAACCGGATGACAAATGGGGCGAGGTG CCCTGCGCCTTTGTGGAGCTGAAACCGGAGGCCACGGTGGATGAGGCCGGGTTGATCGCTTTCTCGCGTGAAACGCTTGC GGGGTTCAAAGCGCCCAAAAAGGTGGTGTTTCAGGAATTGCCCAAGACCTCGACCGGCAAGATACAGAAGTTCGAATTGC GCAAGCTGGCCGCAGAAATCTAG Protein sequence : MGWMSNETGLDKCAANHVPLTPLSHLKRAAVVFANHTAIVYGDVRRSYGEHAARATRLASALAAKGVAPGDVVATLLPNV PAQVEAHFGVPACGAVLNTINTRLDVDTVAYILEHGEARMVLVDSQFLDLAEAACATLASPPTLIEVPDAVAGIEASGRH QTYEDLIAAGTTDFDWIMPQDEWESLALNYTSGTTGRPKGVVYHHRGAYLMTMGTVISWRMTLHPTFMQIVPLFHCNGWN HAWMMPLIGGTLVCCRDITAPAIFNAIADEKVTHFGGAPIVLNMLVNAPSEERRTIEHPVEIFTAGAPPAPATLAKVEAL GFNVTQVYGLTETYGHVTECLWRSEWDGHEAEAKAAIKSRQGVPFPMMEDIVVMDADMTPVPTDASTQGEIMIRGNSVMK GYYKNPQATSEAFAGGYFHSGDIAVQHDDSYIQIADRAKDIIISGGENISSVEVEGVLMAHDDVMLAAVVAKPDDKWGEV PCAFVELKPEATVDEAGLIAFSRETLAGFKAPKKVVFQELPKTSTGKIQKFELRKLAAEI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01500.1 | AMP-binding protein domain | Not tested | PAGI-1 | Protein | 2e-110 | 50 |
