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Name : tetA (RD1_3936) Accession : YP_684078.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Resistance Product : tetracycline resistance protein Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2814 EC number : - Position : 3797388 - 3798593 bp Length : 1206 bp Strand : + Note : - DNA sequence : GTGAAACCCGCCGTCGTTTTCATCCTGATGACCATGATGATTGATGCGATGGGCATCGGGCTGATCATCCCCGTCATGCC CGACCTGTTCCAGGAGGTGGGCGCGGGCGATCTGGGCACCGCAGCGCTCTGGGGCGGGATATTGGCCACGGCATTTGCGG TCATGCAGTTCTTCTTTGGGCCCGTGATCGGCGGTCTGTCAGATCGCTTTGGGCGCAGGCCAATCCTGCTGGTATCACTG TTTGTGATGATGCTGGATTACCTCGTCATGGCGCTGGCAGGCAGCATCTGGCTGTTGCTGATCGGGCGCATGATCGGCGG GGTCACGGCTGCGACACAGGCAACGGCCAATGCCTATATGGCGGACATTTCGGCCCCGCAGGACCGGGCCGCGAACTTCG GCCTGATCGGTGCGGCTTTCGGTGTCGGCTTCGTGCTTGGCCCCCTGATTGGCGGCCTGCTGGCTGAATTCGGAACCCGC GCCCCGTTTTATGCCGCTGCCGCCTGCGCCGGGTTGAATGCGATCTTCGGCTATTTCGTGCTCAAGGAAACGCTGCCCGC CAGCAAACGGCGCCCTTTCGAGTGGCGGCGCGCCAACCCTTTCGGCAGTTTTCGCCACCTCAGCAAACTGCATGCGCTGG GGCCGTTCCTGATCGTATTTTTTCTCTATCAGGTGGCATTCGCCGTTTACCCCGCCATCTGGTCCTTCTTTGGCAAGGAA CGGTTCGGTTGGGAACCTGCGACCATCGGGCTGAGCCTTGCGCTGTTCGGCATCATGATGGCCATCGTGCAGGGCGGTCT GATCCGCCCCGTGATGCGTCTGCTGGGCGCGCGTGGCACGGTCGTTTATGGCCATATTTTTGACATCTGTGTATTTCTGG CCCTCGCCTTTGTCACCAGTGGCACCATCGCCCTGATCCTGACACCGCTCGCAGCCCTCGCCGCTGTGATCACCCCAGCC CTGCAAGGCATCATGTCCAAATCCGTCGGACCCGACGCGCAGGGCGAGTTGCAAGGCGCGCTCACCTCGCTCAGCGCACT TGCGATGATCCTGTCACCACTGGTCATGACGGGCACTTTCGCAGCCTTCACCGGCCCGGATGCGCCCATTTACGCGCCGG GCGCGCCTTTCATCCTGTCGGCTGGATTGATCGTCATCGGTCTGACCATTTTCATCACACGCGGGCGCGCCGCATCGTTT TCCTGA Protein sequence : MKPAVVFILMTMMIDAMGIGLIIPVMPDLFQEVGAGDLGTAALWGGILATAFAVMQFFFGPVIGGLSDRFGRRPILLVSL FVMMLDYLVMALAGSIWLLLIGRMIGGVTAATQATANAYMADISAPQDRAANFGLIGAAFGVGFVLGPLIGGLLAEFGTR APFYAAAACAGLNAIFGYFVLKETLPASKRRPFEWRRANPFGSFRHLSKLHALGPFLIVFFLYQVAFAVYPAIWSFFGKE RFGWEPATIGLSLALFGIMMAIVQGGLIRPVMRLLGARGTVVYGHIFDICVFLALAFVTSGTIALILTPLAALAAVITPA LQGIMSKSVGPDAQGELQGALTSLSALAMILSPLVMTGTFAAFTGPDAPIYAPGAPFILSAGLIVIGLTIFITRGRAASF S |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 4e-50 | 44 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 4e-50 | 44 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 4e-50 | 44 |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 6e-50 | 44 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 6e-50 | 44 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 8e-50 | 44 |
| tet(G) | AAK02051.1 | tetracycline resistance protein | Not tested | SGI1 | Protein | 2e-43 | 41 |
| tetA(G) | ABZ01843.1 | TetA(G) | Not tested | SGI2 | Protein | 2e-43 | 41 |
| tetA(G) | AGK06974.1 | TetA(G) | Not tested | SGI1 | Protein | 2e-43 | 41 |
| tetA(G) | AGK07104.1 | TetA(G) | Not tested | SGI1 | Protein | 2e-43 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| tetA | YP_684078.1 | tetracycline resistance protein | X75761.gene.p01 | Protein | 3e-50 | 44 |
| tetA | YP_684078.1 | tetracycline resistance protein | AF534183.gene.p01 | Protein | 4e-50 | 44 |
| tetA | YP_684078.1 | tetracycline resistance protein | NC_010410.6002597.p0 | Protein | 4e-50 | 44 |
| tetA | YP_684078.1 | tetracycline resistance protein | CP001485.1.gene2821. | Protein | 4e-50 | 44 |
| tetA | YP_684078.1 | tetracycline resistance protein | NC_011586.7045189.p0 | Protein | 1e-45 | 43 |
| tetA | YP_684078.1 | tetracycline resistance protein | Y19114.gene.p01 | Protein | 7e-52 | 42 |
| tetA | YP_684078.1 | tetracycline resistance protein | AY264780.2.gene3.p01 | Protein | 9e-49 | 42 |
| tetA | YP_684078.1 | tetracycline resistance protein | AF090987.gene.p01 | Protein | 6e-46 | 42 |
| tetA | YP_684078.1 | tetracycline resistance protein | NC_009085.4918440.p0 | Protein | 7e-41 | 42 |
