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Name : xylA (RD1_3705) Accession : YP_683863.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 3575033 - 3576334 bp Length : 1302 bp Strand : + Note : catalyzes the interconversion of D-xylose to D-xylulose DNA sequence : ATGACCGATTTCTTCAAGGACATCCCCGCCATCCGCTATGAGGGACCCGATACCGAGAACGAATTTGCGTTCCGGCACTA TAATCCGGATGAGGTCGTCATGGGCAAGACGCTCAAGGATCACTTGCGGTTTGCCTGCGCCTATTGGCACAGTTTTGCAT GGCCGGGCGGCGACCCCTTTGGCGGGCAGACCTTTGAGCGTCCGTGGTTCGGGGACACGATGGAGCTGGCGAAACTCAAG GCGGACGTCGCCTTTGACATGTTTGAACGTCTGGGCGTGCCCTATTTCTGTTTTCACGATGCAGACGTACGCCCCGAAGG CGACACCTTTGCCGAAAGCACCAAGAACCTCGAAGAAATCACCGACTATTTCGCCGAAAAAATGGACGCAACAGGCGTCA AACTGCTGTGGGGAACGGCCAATCTGTTCTCGCATCGCCGCTTTATGGCCGGGGCGGCGACCAATCCCGACCCCGAGGTT TTTGCCTATTCCGCCGCGACGATCAAATCCTGCATGGATGCGACCCGGAAACTGGGCGGCGAGAACTATGTGCTCTGGGG CGGGCGCGAAGGCTATGAAACGCTGCTCAACACCGACATGGCCCGCGAACGCGCGCAGGCGGGCCGTATGTTGCAAATGG TGGTCGATTACAAGCACAAGACCGGTTTTGCAGGCACCATCCTGATCGAACCCAAACCGCAGGAACCGACCAAGCACCAG TATGATTACGATGTGGCGACGGTCTATGGCTTCCTCAAGGATTTCGGCCTCGAAGGTGAGGTCAAAGTCAACATCGAACA GGGCCATGCCATTCTTGCAGGCCATAGTTTTGAACATGAGTTGGCGCTCGCACGGGCACTGGGGATTTTCGGCTCGATCG ACATGAACCGCAATGACTACCAATCCGGCTGGGATACCGACCAGTTTCCAAACAATGTCCCCGAGATGGCGCTTGCCTAT TACGAAGTTCTGCGCGCCGGGGGCTTCGACACAGGGGGCACCAATTTTGATGCCAAGCTGCGCCGGCAATCGCTTGACCC GGCGGATCTGATCCTTGCGCATGTGGGTGGTATGGATGCATGCGCTGCGGGGTTAAAGGCCGCTGCGGCCATGCTGGAGG ATGGCAAGCTAGAGGCCGCGCGCGAGGCGCGCTATGCAGGCTGGTCAGAAGGTTTGGGGCAAAAACTGCTGACCTCTGAT CTGGCGGAGATATCAGATCTGGTGATTGCAAAAGGCATCAACCCACAGCCCCGCTCAGGACGGCAGGAGCGGCTGGAAAA TCTGGTGAACAAATACCTTTAA Protein sequence : MTDFFKDIPAIRYEGPDTENEFAFRHYNPDEVVMGKTLKDHLRFACAYWHSFAWPGGDPFGGQTFERPWFGDTMELAKLK ADVAFDMFERLGVPYFCFHDADVRPEGDTFAESTKNLEEITDYFAEKMDATGVKLLWGTANLFSHRRFMAGAATNPDPEV FAYSAATIKSCMDATRKLGGENYVLWGGREGYETLLNTDMARERAQAGRMLQMVVDYKHKTGFAGTILIEPKPQEPTKHQ YDYDVATVYGFLKDFGLEGEVKVNIEQGHAILAGHSFEHELALARALGIFGSIDMNRNDYQSGWDTDQFPNNVPEMALAY YEVLRAGGFDTGGTNFDAKLRRQSLDPADLILAHVGGMDACAAGLKAAAAMLEDGKLEAAREARYAGWSEGLGQKLLTSD LAEISDLVIAKGINPQPRSGRQERLENLVNKYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 3e-101 | 50 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 2e-101 | 50 |
