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Name : kdsD (RD1_0368) Accession : YP_680774.1 Strain : Roseobacter denitrificans OCh 114 Genome accession: NC_008209 Putative virulence/resistance : Virulence Product : arabinose 5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 361601 - 362563 bp Length : 963 bp Strand : + Note : - DNA sequence : ATGAGCGGGATATTTCAAGATACCGCGCGCCGTGTAATCCGGATCGAGATCGACGCCCTGCAACAGCTGGAGCAGAGCAT CGACGACAGCTTTGCCAAGGCTGTTGAACTGATGATTGCCGCGACCGGGCGCATTATCGTCTGCGGCATGGGAAAATCGG GCCATATCGCGCGCAAGATCGCCGCGACCTTGGCCAGCACCGGCACACCTGCGCATTTCGTACACCCGGCCGAAGCCAGC CATGGCGATCTTGGGATGATGGGGGCCGGCGATGTGGTGATCGTCCTGTCCAACTCCGGCGAAACCCCGGAACTGGCCGA TGTCATTGCATATACGCGCCGCTTTTCCATTCCGATGATCGGGGTGGCAAGCCGCCCTGAGTCCACGCTGCTGCGGCAGT CTGATGTGGCCCTGGTTCTGCCGCGCGCGCAGGAGGCCTGTGGCACGGGCATCGTTCCGACCTCATCGACAACCATGACG CTGGCGCTCGGCGATGCGCTGGCCGTCGCCTTGATGGAACACCGTAAATTCACGCCAGAACACTTCCGCGCGTTTCATCC TGGCGGAAAACTTGGCGCCCAGTTGAGCAAGGTCTCGGACCTCATGCACACGGGGCGCGCTGTCCCGGTCGTGCCGGGCG ACGCCCCAATGTCCGAAGCACTGCGCGAAATCGGCCAGAAAGGATTTGGAGTCGTCGCGGTATCTGACCCGCAAGGGCTG TTGCAAGGGATCATCACAAACGGGGACATCAGCCGACATATGGACGGCTTGGCCTCCTTTGAGGCGCATAACGTCATGAC ACCATCACCCGTGACGATCCCGCCTGATGCCTTGGCCGAACAGGCAGTCGGCATCATGAATGACAAGAAGATCACCTGCC TGCTGGTCGTCGATCCGCAGGAACCCCGGAAACTGGTCGGGCTGATCCATATCCACGACTGCCTGCGTATTGGCCTGGGG TGA Protein sequence : MSGIFQDTARRVIRIEIDALQQLEQSIDDSFAKAVELMIAATGRIIVCGMGKSGHIARKIAATLASTGTPAHFVHPAEAS HGDLGMMGAGDVVIVLSNSGETPELADVIAYTRRFSIPMIGVASRPESTLLRQSDVALVLPRAQEACGTGIVPTSSTTMT LALGDALAVALMEHRKFTPEHFRAFHPGGKLGAQLSKVSDLMHTGRAVPVVPGDAPMSEALREIGQKGFGVVAVSDPQGL LQGIITNGDISRHMDGLASFEAHNVMTPSPVTIPPDALAEQAVGIMNDKKITCLLVVDPQEPRKLVGLIHIHDCLRIGLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 2e-53 | 41 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-53 | 41 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 4e-53 | 41 |
